RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 CKAP2LQ8IYA6 745 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 IFNL3Q8IZI9 196 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 ARMT1Q9H993 441 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 EPB41L4AQ9HCS5 686 aaPredicted RBP16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 SPTLC3Q9NUV7 552 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 GGA1Q9UJY5 639 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 NEDD4P46934 1319 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 B4E1Z4 1266 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 HSPA6P17066 643 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 HSP90AA2PQ14568 343 aaPredicted RBP16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 TMEM87BQ96K49 555 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 NAPBQ9H115 298 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
NIPAL3-203ENST00000358028 ZNF541Q9H0D2 1346 aa16.6■□□□□ 0.25
NIPAL3-203ENST00000358028 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
NIPAL3-203ENST00000358028 RIMBP2O15034 1052 aa16.6■□□□□ 0.25
NIPAL3-203ENST00000358028 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.25
NIPAL3-203ENST00000358028 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
NIPAL3-203ENST00000358028 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
NIPAL3-203ENST00000358028 DYNC1I1O14576 645 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 WDR90Q96KV7 1748 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 GSG1L2A8MUP6 293 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 AP5Z1O43299 807 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 GNAT2P19087 354 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 METAP2P50579 478 aaKnown RBP eCLIP16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 NIM1KQ8IY84 436 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 JDP2Q8WYK2 163 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 VPS33BQ9H267 617 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 CBX8Q9HC52 389 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
NIPAL3-203ENST00000358028 FZD9O00144 591 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 ATP2B4P23634 1241 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 KLRK1P26718 216 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 CTDSPL2Q05D32 466 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 BRAPQ7Z569 592 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 LCORLQ8N3X6 602 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 IGDCC4Q8TDY8 1250 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 MAP7D2Q96T17 732 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 ANKRD2Q9GZV1 360 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 ZNF804BA4D1E1 1349 aa16.58■□□□□ 0.24
NIPAL3-203ENST00000358028 UQCRHLA0A096LP55 91 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 CDKL5O76039 1030 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 UQCRHP07919 91 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 PLCB2Q00722 1185 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 RBM46Q8TBY0 533 aaKnown RBP16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 EYA3Q99504 573 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 TTC12Q9H892 705 aaPredicted RBP16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 CNNM2Q9H8M5 875 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 LRP2BPQ9P2M1 347 aa16.57■□□□□ 0.24
NIPAL3-203ENST00000358028 PRKAB2O43741 272 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 ME1P48163 572 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 SGMS1Q86VZ5 419 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 KRT23Q9C075 422 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 RRAGCQ9HB90 399 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 SENP2Q9HC62 589 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 SCN4AP35499 1836 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 YDJCA8MPS7 323 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 ZBTB43O43298 467 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 TDO2P48775 406 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 KIF23Q02241 960 aaPredicted RBP16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 UBE4AQ14139 1066 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 DOK7Q18PE1 504 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 NFXL1Q6ZNB6 911 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 LUZP1Q86V48 1076 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 TXNRD3Q86VQ6 643 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 ZC3H12CQ9C0D7 883 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 LEMD3Q9Y2U8 911 aa16.56■□□□□ 0.24
NIPAL3-203ENST00000358028 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 GOLGA8AA7E2F4 631 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 YEATS4O95619 227 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 CDC27P30260 824 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 CDC25BP30305 580 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 LIFRP42702 1097 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 ZNF165P49910 485 aa16.55■□□□□ 0.24
NIPAL3-203ENST00000358028 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms