RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TNKSO95271 1327 aa18.31■□□□□ 0.52
PHTF1-201ENST00000357783 BTBD18B2RXH4 712 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 TOM1O60784 492 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 PPP6R2O75170 966 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 SYKP43405 635 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 SLC10A5Q5PT55 438 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 ZNF384Q8TF68 577 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 ESR2Q92731 530 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 MYH13Q9UKX3 1938 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 RPS8P62241 208 aaKnown RBP18.3■□□□□ 0.52
PHTF1-201ENST00000357783 VPS72Q15906 364 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 FANCBQ8NB91 859 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 MYH6P13533 1939 aa18.3■□□□□ 0.52
PHTF1-201ENST00000357783 MMP1P03956 469 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 SAFBQ15424 915 aaKnown RBP eCLIP18.29■□□□□ 0.52
PHTF1-201ENST00000357783 NBPF11Q86T75 865 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 NOSTRINQ8IVI9 506 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 DIS3L2Q8IYB7 885 aaKnown RBP18.29■□□□□ 0.52
PHTF1-201ENST00000357783 MRFAP1L1Q96HT8 127 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 NLRP3Q96P20 1036 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 NYXQ9GZU5 481 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 ZPR1O75312 459 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 PRDM1O75626 825 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 FAM182BQ5T319 152 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
PHTF1-201ENST00000357783 CACTINQ8WUQ7 758 aaKnown RBP18.29■□□□□ 0.52
PHTF1-201ENST00000357783 ZMYND15Q9H091 742 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 BTAF1O14981 1849 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 CCDC196A0A1B0GTZ2 297 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 RBM10P98175 930 aaKnown RBP18.29■□□□□ 0.52
PHTF1-201ENST00000357783 ISM2Q6H9L7 571 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 FBXO33Q7Z6M2 555 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 MTA3Q9BTC8 594 aa18.29■□□□□ 0.52
PHTF1-201ENST00000357783 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
PHTF1-201ENST00000357783 DEXIO95424 95 aa18.28■□□□□ 0.52
PHTF1-201ENST00000357783 SEC23AQ15436 765 aa18.28■□□□□ 0.52
PHTF1-201ENST00000357783 HPSEQ9Y251 543 aa18.28■□□□□ 0.52
PHTF1-201ENST00000357783 DUOX1Q9NRD9 1551 aa18.28■□□□□ 0.52
PHTF1-201ENST00000357783 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
PHTF1-201ENST00000357783 NLRP12P59046 1061 aa18.27■□□□□ 0.52
PHTF1-201ENST00000357783 RESP18Q5W5W9 173 aa18.27■□□□□ 0.52
PHTF1-201ENST00000357783 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
PHTF1-201ENST00000357783 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.52
PHTF1-201ENST00000357783 ARID5BQ14865 1188 aa18.27■□□□□ 0.51
PHTF1-201ENST00000357783 RC3H1Q5TC82 1133 aaKnown RBP18.27■□□□□ 0.51
PHTF1-201ENST00000357783 BRIP1Q9BX63 1249 aa18.27■□□□□ 0.51
PHTF1-201ENST00000357783 CCNL1Q9UK58 526 aaPredicted RBP18.27■□□□□ 0.51
PHTF1-201ENST00000357783 JAG2Q9Y219 1238 aa18.27■□□□□ 0.51
PHTF1-201ENST00000357783 CUTAO60888 179 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 TOB1P50616 345 aaPredicted RBP18.26■□□□□ 0.51
PHTF1-201ENST00000357783 MECOMQ03112 1051 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 NR5A1Q13285 461 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 NSUN4Q96CB9 384 aaKnown RBP18.26■□□□□ 0.51
PHTF1-201ENST00000357783 PRIMPOLQ96LW4 560 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 TIGD1Q96MW7 591 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 ZSCAN10Q96SZ4 725 aaPredicted RBP18.26■□□□□ 0.51
PHTF1-201ENST00000357783 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.26■□□□□ 0.51
PHTF1-201ENST00000357783 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 HIBADHP31937 336 aaKnown RBP18.26■□□□□ 0.51
PHTF1-201ENST00000357783 RCAN1P53805 252 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
PHTF1-201ENST00000357783 EVX2Q03828 476 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 FILIP1Q7Z7B0 1213 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 MYRIPQ8NFW9 859 aa18.26■□□□□ 0.51
PHTF1-201ENST00000357783 AATFQ9NY61 560 aaKnown RBP eCLIP18.26■□□□□ 0.51
PHTF1-201ENST00000357783 DYNC1I1O14576 645 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 SEMA3EO15041 775 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 PNOCQ13519 176 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 SPECC1Q5M775 1068 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 FAM13BQ9NYF5 915 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 USP17L12C9JPN9 530 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 USP17L21D6R901 530 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 RGL2O15211 777 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
PHTF1-201ENST00000357783 TPTE2Q6XPS3 522 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 KRI1Q8N9T8 703 aaKnown RBP18.25■□□□□ 0.51
PHTF1-201ENST00000357783 OXER1Q8TDS5 423 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 BPIFA3Q9BQP9 254 aa18.25■□□□□ 0.51
PHTF1-201ENST00000357783 FOXP1Q9H334 677 aaPredicted RBP18.25■□□□□ 0.51
PHTF1-201ENST00000357783 RTCBQ9Y3I0 505 aaKnown RBP18.25■□□□□ 0.51
PHTF1-201ENST00000357783 NPHP1O15259 732 aa18.24■□□□□ 0.51
PHTF1-201ENST00000357783 ATP2B1P20020 1258 aa18.24■□□□□ 0.51
PHTF1-201ENST00000357783 PRDX5P30044 214 aa18.24■□□□□ 0.51
PHTF1-201ENST00000357783 ANKRD2Q9GZV1 360 aa18.24■□□□□ 0.51
PHTF1-201ENST00000357783 KCNH3Q9ULD8 1083 aa18.24■□□□□ 0.51
PHTF1-201ENST00000357783 hCG_1642624A0A1W2PR95 340 aa18.24■□□□□ 0.51
PHTF1-201ENST00000357783 AKAP17AQ02040 695 aaKnown RBP18.24■□□□□ 0.51
PHTF1-201ENST00000357783 LRRC8AQ8IWT6 810 aa18.24■□□□□ 0.51
PHTF1-201ENST00000357783 FAM237AA0A1B0GTK4 181 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 LONRF3Q496Y0 759 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 CATIPQ7Z7H3 387 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 TXNRD3Q86VQ6 643 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms