RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 INHAP05111 366 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 ELNP15502 786 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 RHBDL3P58872 404 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 TIMM10P62072 90 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 RASGRF1Q13972 1273 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 SPTY2D1Q68D10 685 aaPredicted RBP10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 ZSCAN29Q8IWY8 852 aaPredicted RBP10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 ZNF384Q8TF68 577 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
COL4A3BP-202ENST00000357457 ALPK3Q96L96 1907 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 TNPO2O14787 897 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 MAP4K4O95819 1239 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 TFRCP02786 760 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 CT47B1P0C2W7 299 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 BTDP43251 543 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 FAM110CQ1W6H9 321 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 DZIP1Q86YF9 867 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 SMCR8Q8TEV9 937 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 XAGE2Q96GT9 111 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 DEFB118Q96PH6 123 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 SMC4Q9NTJ3 1288 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 ABCF2Q9UG63 623 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 GJD2Q9UKL4 321 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 NOB1Q9ULX3 412 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 DNAH12Q6ZR08 3092 aa10.64□□□□□ -0.71
COL4A3BP-202ENST00000357457 MROH7-TTC4A0A0A0MT08 1334 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 LAMA2P24043 3122 aaKnown RBP10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 EVI5O60447 810 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 GCLCP48506 637 aaPredicted RBP10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 MECOMQ03112 1051 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 TREML2Q5T2D2 321 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 ERICH6Q7L0X2 663 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 ANKRD13CQ8N6S4 541 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 COA7Q96BR5 231 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 CDCA7LQ96GN5 454 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 OSBPL5Q9H0X9 879 aaPredicted RBP10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 AKAP2Q9Y2D5 859 aa10.63□□□□□ -0.71
COL4A3BP-202ENST00000357457 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 A0A1B0GUL7 405 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 BMP8BP34820 402 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 PICALMQ13492 652 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 MTX1Q13505 466 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 GSE1Q14687 1217 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 MVPQ14764 893 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 SH3D19Q5HYK7 790 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 NECAB2Q7Z6G3 386 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 CCDC84Q86UT8 332 aaPredicted RBP10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 ANKLE1Q8NAG6 615 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 ZNF280CQ8ND82 737 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 NSUN4Q96CB9 384 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 PAWRQ96IZ0 340 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 MEIS3Q99687 375 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
COL4A3BP-202ENST00000357457 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 ATAD5Q96QE3 1844 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 LDHCP07864 332 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 CAP2P40123 477 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 TFCP2Q12800 502 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 SPP2Q13103 211 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 RRP1BQ14684 758 aaKnown RBP10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 ARHGAP45Q92619 1136 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 GDF15Q99988 308 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 HMG20BQ9P0W2 317 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 STAP2Q9UGK3 403 aa10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
COL4A3BP-202ENST00000357457 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 UNC80Q8N2C7 3258 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 SRGAP3O43295 1099 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 HMGCRP04035 888 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 HOXA7P31268 230 aaPredicted RBP10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 GSTO1P78417 241 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 PABPC4Q13310 644 aaKnown RBP eCLIP10.6□□□□□ -0.712e-17■■■■□ 21.8
COL4A3BP-202ENST00000357457 GPR153Q6NV75 609 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 METTL16Q86W50 562 aaKnown RBP10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 SPATA5Q8NB90 893 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 WDR18Q9BV38 432 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 ASCC2Q9H1I8 757 aaPredicted RBP10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 MORF4L1Q9UBU8 362 aa10.6□□□□□ -0.71
COL4A3BP-202ENST00000357457 FAM196BA6NMK8 535 aa10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 GNAI3P08754 354 aa10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 ARID4AP29374 1257 aaPredicted RBP10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 NUBP1P53384 320 aa10.59□□□□□ -0.71
COL4A3BP-202ENST00000357457 HMGCS2P54868 508 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms