RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 HABP4Q5JVS0 413 aaKnown RBP12.56□□□□□ -0.4
LINC01560-201ENST00000357412 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
LINC01560-201ENST00000357412 TTC39AQ5SRH9 613 aa12.56□□□□□ -0.4
LINC01560-201ENST00000357412 TREML2Q5T2D2 321 aa12.56□□□□□ -0.4
LINC01560-201ENST00000357412 ADGRA1Q86SQ6 560 aa12.56□□□□□ -0.4
LINC01560-201ENST00000357412 AATFQ9NY61 560 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01560-201ENST00000357412 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
LINC01560-201ENST00000357412 GABRQQ9UN88 632 aa12.56□□□□□ -0.4
LINC01560-201ENST00000357412 BAG3O95817 575 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 CAP2P40123 477 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 ZAP70P43403 619 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 OS9Q13438 667 aaPredicted RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 MIER1Q8N108 512 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 SMCR8Q8TEV9 937 aaPredicted RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 PI4KBQ9UBF8 816 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 HERC5Q9UII4 1024 aaKnown RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
LINC01560-201ENST00000357412 OTOFQ9HC10 1997 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
LINC01560-201ENST00000357412 IGSF3O75054 1194 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 GJB1P08034 283 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 GJA8P48165 433 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 FLT3LGP49771 235 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 UBE2Q1Q7Z7E8 422 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 ITPRIPQ8IWB1 547 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
LINC01560-201ENST00000357412 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
LINC01560-201ENST00000357412 EAF2Q96CJ1 260 aaPredicted RBP12.54□□□□□ -0.4
LINC01560-201ENST00000357412 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
LINC01560-201ENST00000357412 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
LINC01560-201ENST00000357412 USP17L5A8MUK1 530 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 CCL5P13501 91 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 HMGCS2P54868 508 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 UBXN2AP68543 259 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 JAG1P78504 1218 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 IRF5Q13568 498 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 FAM110CQ1W6H9 321 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
LINC01560-201ENST00000357412 ANKRD13CQ8N6S4 541 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 TGFBRAP1Q8WUH2 860 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
LINC01560-201ENST00000357412 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 CCDC8Q9H0W5 538 aaPredicted RBP12.53□□□□□ -0.4
LINC01560-201ENST00000357412 RNF208Q9H0X6 261 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 DNAJC18Q9H819 358 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 FLT1P17948 1338 aa12.53□□□□□ -0.4
LINC01560-201ENST00000357412 LAMB1P07942 1786 aa12.52□□□□□ -0.41
LINC01560-201ENST00000357412 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.41
LINC01560-201ENST00000357412 ADCY3O60266 1144 aa12.52□□□□□ -0.41
LINC01560-201ENST00000357412 PLCG2P16885 1265 aa12.52□□□□□ -0.41
LINC01560-201ENST00000357412 DYNLL1P63167 89 aaKnown RBP12.52□□□□□ -0.41
LINC01560-201ENST00000357412 FOXP4Q8IVH2 680 aaPredicted RBP12.52□□□□□ -0.41
LINC01560-201ENST00000357412 PXYLP1Q8TE99 480 aa12.52□□□□□ -0.41
LINC01560-201ENST00000357412 WDR18Q9BV38 432 aa12.52□□□□□ -0.41
LINC01560-201ENST00000357412 UNC93B1Q9H1C4 597 aa12.52□□□□□ -0.41
LINC01560-201ENST00000357412 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.41
LINC01560-201ENST00000357412 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
LINC01560-201ENST00000357412 H0YGN5 161 aa12.51□□□□□ -0.41
LINC01560-201ENST00000357412 ELNP15502 786 aa12.51□□□□□ -0.41
LINC01560-201ENST00000357412 BACE1P56817 501 aa12.51□□□□□ -0.41
LINC01560-201ENST00000357412 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
LINC01560-201ENST00000357412 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
LINC01560-201ENST00000357412 ASCC2Q9H1I8 757 aaPredicted RBP12.51□□□□□ -0.41
LINC01560-201ENST00000357412 AS3MTQ9HBK9 375 aa12.51□□□□□ -0.41
LINC01560-201ENST00000357412 PALD1Q9ULE6 856 aa12.51□□□□□ -0.41
LINC01560-201ENST00000357412 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
LINC01560-201ENST00000357412 INHAP05111 366 aa12.5□□□□□ -0.41
LINC01560-201ENST00000357412 ASNSP08243 561 aa12.5□□□□□ -0.41
LINC01560-201ENST00000357412 CYP7A1P22680 504 aa12.5□□□□□ -0.41
LINC01560-201ENST00000357412 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
LINC01560-201ENST00000357412 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC01560-201ENST00000357412 MTMR2Q13614 643 aa12.5□□□□□ -0.41
LINC01560-201ENST00000357412 PANK1Q8TE04 598 aa12.5□□□□□ -0.41
LINC01560-201ENST00000357412 COA7Q96BR5 231 aa12.5□□□□□ -0.41
LINC01560-201ENST00000357412 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
LINC01560-201ENST00000357412 IDH1O75874 414 aaKnown RBP12.49□□□□□ -0.41
LINC01560-201ENST00000357412 GDF11O95390 407 aa12.49□□□□□ -0.41
LINC01560-201ENST00000357412 SGPL1O95470 568 aa12.49□□□□□ -0.41
LINC01560-201ENST00000357412 HOXA7P31268 230 aaPredicted RBP12.49□□□□□ -0.41
LINC01560-201ENST00000357412 DIEXFQ68CQ4 756 aaKnown RBP12.49□□□□□ -0.41
LINC01560-201ENST00000357412 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
LINC01560-201ENST00000357412 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
LINC01560-201ENST00000357412 GINM1Q9NU53 330 aa12.49□□□□□ -0.41
LINC01560-201ENST00000357412 SAP30BPQ9UHR5 308 aaKnown RBP12.49□□□□□ -0.41
LINC01560-201ENST00000357412 GJD2Q9UKL4 321 aa12.49□□□□□ -0.41
LINC01560-201ENST00000357412 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
LINC01560-201ENST00000357412 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 HLA-DOAP06340 250 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01560-201ENST00000357412 AACSQ86V21 672 aa12.48□□□□□ -0.41
LINC01560-201ENST00000357412 CRACR2BQ8N4Y2 399 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms