RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TRHP20396 242 aaPredicted RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 MAP7Q14244 749 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 C11orf57Q6ZUT1 292 aaPredicted RBP7.37□□□□□ -1.23
TRIM38-201ENST00000357085 HOMER3Q9NSC5 361 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 MRFAP1Q9Y605 127 aa7.37□□□□□ -1.23
TRIM38-201ENST00000357085 ADCY9O60503 1353 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 PSMA7O14818 248 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 EIF3BP55884 814 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 PPP1R42Q7Z4L9 355 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CACNA2D3Q8IZS8 1091 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 PLEKHA4Q9H4M7 779 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 UBN2Q6ZU65 1347 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 MCMDC2Q4G0Z9 681 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 MTA3Q9BTC8 594 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CARD14Q9BXL6 1004 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 ZCCHC17Q9NP64 241 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 RBM8AQ9Y5S9 174 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 N4BP3O15049 544 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 GNAT2P19087 354 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CFAP221Q4G0U5 840 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC174Q6PII3 467 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 WAPLQ7Z5K2 1190 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC77Q9BR77 488 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 A1CFQ9NQ94 594 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CHD4Q14839 1912 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CRYMQ14894 314 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 ARHGAP27Q6ZUM4 889 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 TULP4Q9NRJ4 1543 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 SSBP05455 408 aaKnown RBP eCLIP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 EEF1GP26641 437 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 ICA1Q05084 483 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 IGSF22Q8N9C0 903 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 NOX5Q96PH1 765 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 DSCC1Q9BVC3 393 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 KNDC1Q76NI1 1749 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 NUTM2BA6NNL0 878 aaPredicted RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 NUTM2EB1AL46 878 aaPredicted RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CCZ1BP86790 482 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CCZ1P86791 482 aaPredicted RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 MEIS3Q99687 375 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 FAM129AQ9BZQ8 928 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 BMP2KQ9NSY1 1161 aaPredicted RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 THEGQ9P2T0 379 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 SH3TC1Q8TE82 1336 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CFAP73A6NFT4 308 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 TBC1D8O95759 1140 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 TCP1P17987 556 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 RRS1Q15050 365 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 ANO1Q5XXA6 986 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 ZNF365Q70YC5 407 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 FYB1O15117 783 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CPP00450 1065 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CALM1P0DP23 149 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CALM2P0DP24 149 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CALM3P0DP25 149 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 SYCE1Q8N0S2 351 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 NGDNQ8NEJ9 315 aaKnown RBP7.36□□□□□ -1.23
TRIM38-201ENST00000357085 CABP1Q9NZU7 370 aa7.36□□□□□ -1.23
TRIM38-201ENST00000357085 AKAP12Q02952 1782 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 PIK3C2BO00750 1634 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 PEX19P40855 299 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 C8orf74Q6P047 294 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 LMO7Q8WWI1 1683 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 FBXO3Q9UK99 471 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 STK24Q9Y6E0 443 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 KIF4AO95239 1232 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 SULT6B1Q6IMI4 303 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 ARMC2Q8NEN0 867 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 HNRNPCL1O60812 293 aaKnown RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 ATP5HO75947 161 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 CETN2P41208 172 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 PLCD1P51178 756 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 LZICQ8WZA0 190 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 LSG1Q9H089 658 aaKnown RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 SENP3Q9H4L4 574 aaPredicted RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 MTRF1LQ9UGC7 380 aaKnown RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 RCOR1Q9UKL0 485 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 WASLO00401 505 aaPredicted RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 CDK5RAP3Q96JB5 506 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 ZNF287Q9HBT7 754 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 FRMD3A2A2Y4 597 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 SSRP1Q08945 709 aaKnown RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 ARHGAP18Q8N392 663 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 SYTL4Q96C24 671 aaPredicted RBP7.35□□□□□ -1.23
TRIM38-201ENST00000357085 STIM2Q9P246 746 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 IRX4P78413 519 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 ZNF446Q9NWS9 450 aa7.35□□□□□ -1.23
TRIM38-201ENST00000357085 TRIM4Q9C037 500 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 SLC24A3Q9HC58 644 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 MYH7P12883 1935 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 ACTN4O43707 911 aaKnown RBP7.34□□□□□ -1.23
TRIM38-201ENST00000357085 ATP2C2O75185 946 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 KIAA0753Q2KHM9 967 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 C10orf76Q5T2E6 689 aa7.34□□□□□ -1.23
TRIM38-201ENST00000357085 MICAL1Q8TDZ2 1067 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms