RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 XIRP1Q702N8 1843 aaKnown RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 A0A0U1RQJ8 604 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 PATL2C9JE40 543 aaKnown RBP17.56■□□□□ 0.4
PTBP1-203ENST00000356948 SFPQP23246 707 aaKnown RBP eCLIP17.56■□□□□ 0.44e-7■■□□□ 12.7
PTBP1-203ENST00000356948 ATRIPQ8WXE1 791 aa17.56■□□□□ 0.4
PTBP1-203ENST00000356948 VEGFAP15692 232 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-203ENST00000356948 SERTAD1Q9UHV2 236 aa17.55■□□□□ 0.4
PTBP1-203ENST00000356948 DCCP43146 1447 aa17.55■□□□□ 0.4
PTBP1-203ENST00000356948 RESP18Q5W5W9 173 aa17.55■□□□□ 0.4
PTBP1-203ENST00000356948 LPIN2Q92539 896 aa17.55■□□□□ 0.4
PTBP1-203ENST00000356948 MPHOSPH8Q99549 860 aa17.55■□□□□ 0.4
PTBP1-203ENST00000356948 MYH7P12883 1935 aa17.55■□□□□ 0.4
PTBP1-203ENST00000356948 CDHR2Q9BYE9 1310 aa17.55■□□□□ 0.4
PTBP1-203ENST00000356948 ADKP55263 362 aaKnown RBP17.55■□□□□ 0.4
PTBP1-203ENST00000356948 SMYD4Q8IYR2 804 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-203ENST00000356948 A0A087X0B3 334 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 DYNLL1P63167 89 aaKnown RBP17.54■□□□□ 0.4
PTBP1-203ENST00000356948 CABP5Q9NP86 173 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 SSRP1Q08945 709 aaKnown RBP17.54■□□□□ 0.4
PTBP1-203ENST00000356948 AKNAD1Q5T1N1 836 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 MFSD6Q6ZSS7 791 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 VPS54Q9P1Q0 977 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 TUBE1Q9UJT0 475 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 NMT2O60551 498 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 KRBA2Q6ZNG9 492 aa17.54■□□□□ 0.4
PTBP1-203ENST00000356948 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 ZNF34Q8IZ26 560 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 SAMSN1Q9NSI8 373 aaKnown RBP17.53■□□□□ 0.4
PTBP1-203ENST00000356948 ZNF446Q9NWS9 450 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 LRP2BPQ9P2M1 347 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 DNAI1Q9UI46 699 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 FBXO3Q9UK99 471 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 KLRK1P26718 216 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 TTF1Q15361 905 aaPredicted RBP17.53■□□□□ 0.4
PTBP1-203ENST00000356948 EPSTI1Q96J88 318 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 SPEF2Q9C093 1822 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 TRIM29Q14134 588 aa17.53■□□□□ 0.4
PTBP1-203ENST00000356948 STX17P56962 302 aa17.52■□□□□ 0.4
PTBP1-203ENST00000356948 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
PTBP1-203ENST00000356948 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
PTBP1-203ENST00000356948 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
PTBP1-203ENST00000356948 TAF1P21675 1872 aa17.52■□□□□ 0.4
PTBP1-203ENST00000356948 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.39
PTBP1-203ENST00000356948 KIF18AQ8NI77 898 aa17.52■□□□□ 0.39
PTBP1-203ENST00000356948 DESI2Q9BSY9 194 aa17.52■□□□□ 0.39
PTBP1-203ENST00000356948 IRX2Q9BZI1 471 aaPredicted RBP17.52■□□□□ 0.39
PTBP1-203ENST00000356948 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.39
PTBP1-203ENST00000356948 AFMP43652 599 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 MAP3K12Q12852 859 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 MTF1Q14872 753 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 MAN1B1Q9UKM7 699 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 ECM29Q5VYK3 1845 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 BCL9O00512 1426 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 PLEKHA8P1O95397 391 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 FMNL1O95466 1100 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-203ENST00000356948 MMP1P03956 469 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 MYL5Q02045 173 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 ITPK1Q13572 414 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 KLHL10Q6JEL2 608 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 FBXO2Q9UK22 296 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-203ENST00000356948 CHRNDQ07001 517 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 WTAPQ15007 396 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 RTN1Q16799 776 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 TMEM87BQ96K49 555 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 BPIFA3Q9BQP9 254 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 CSRNP2Q9H175 543 aa17.51■□□□□ 0.39
PTBP1-203ENST00000356948 CCDC66A2RUB6 948 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 PPP6R2O75170 966 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 ADAMTS2O95450 1211 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 CYP7A1P22680 504 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 ZNF384Q8TF68 577 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
PTBP1-203ENST00000356948 KCNQ2O43526 872 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 NIP7Q9Y221 180 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTBP1-203ENST00000356948 ITGB4P16144 1822 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 NEMFO60524 1076 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 SLC5A1P13866 664 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
PTBP1-203ENST00000356948 GSDMDP57764 484 aa17.5■□□□□ 0.39
PTBP1-203ENST00000356948 KRI1Q8N9T8 703 aaKnown RBP17.5■□□□□ 0.39
PTBP1-203ENST00000356948 NUP98P52948 1817 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 TFRCP02786 760 aaKnown RBP17.49■□□□□ 0.39
PTBP1-203ENST00000356948 TOGARAM2Q6ZUX3 1019 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 CRACR2BQ8N4Y2 399 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-203ENST00000356948 NFE2L3Q9Y4A8 694 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 ABCC12Q96J65 1359 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 CDKL5O76039 1030 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 TRIM65Q6PJ69 517 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 DHX58Q96C10 678 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-203ENST00000356948 TRIM34Q9BYJ4 488 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 ATRNO75882 1429 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 EXOC5O00471 708 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 TEX33O43247 280 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 CDC25AP30304 524 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
PTBP1-203ENST00000356948 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
PTBP1-203ENST00000356948 FANCBQ8NB91 859 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms