RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZFPM1Q8IX07 1006 aa21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 MTMR14Q8NCE2 650 aa21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 ZBED3Q96IU2 234 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 OSBPL5Q9H0X9 879 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 GJA3Q9Y6H8 435 aa21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 SIPA1L1O43166 1804 aa21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 SLC3A2P08195 630 aaKnown RBP21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 ZNF280AP59817 542 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 FGD1P98174 961 aa21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 ST3GAL1Q11201 340 aa21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 AMOTL1Q8IY63 956 aa21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 INTS4Q96HW7 963 aaKnown RBP21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 CIZ1Q9ULV3 898 aaPredicted RBP21.4■■□□□ 1.02
SMARCD3-202ENST00000356800 APOBRQ0VD83 1088 aa21.39■■□□□ 1.01
SMARCD3-202ENST00000356800 SLC44A5Q8NCS7 719 aa21.39■■□□□ 1.01
SMARCD3-202ENST00000356800 IGDCC4Q8TDY8 1250 aa21.39■■□□□ 1.01
SMARCD3-202ENST00000356800 SH2B1Q9NRF2 756 aaPredicted RBP21.39■■□□□ 1.01
SMARCD3-202ENST00000356800 CHMP5Q9NZZ3 219 aa21.39■■□□□ 1.01
SMARCD3-202ENST00000356800 SH2B2O14492 632 aaPredicted RBP21.38■■□□□ 1.01
SMARCD3-202ENST00000356800 NPM3O75607 178 aaKnown RBP21.38■■□□□ 1.01
SMARCD3-202ENST00000356800 PDE4BQ07343 736 aa21.38■■□□□ 1.01
SMARCD3-202ENST00000356800 ESR2Q92731 530 aa21.38■■□□□ 1.01
SMARCD3-202ENST00000356800 DPF2Q92785 391 aa21.38■■□□□ 1.01
SMARCD3-202ENST00000356800 CWC22Q9HCG8 908 aaKnown RBP21.38■■□□□ 1.01
SMARCD3-202ENST00000356800 EVCP57679 992 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 TCP10Q12799 353 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 NECAB1Q8N987 351 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 TMEM87BQ96K49 555 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 SENP2Q9HC62 589 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 MYOZ2Q9NPC6 264 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 MYH8P13535 1937 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 RANBP6O60518 1105 aaKnown RBP21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 EGFRP00533 1210 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 SPDYE2Q495Y8 402 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 C16orf86Q6ZW13 317 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 MICALL2Q8IY33 904 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 ZKSCAN3Q9BRR0 538 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 LY9Q9HBG7 655 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 RNF181Q9P0P0 153 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 ZNF70Q9UC06 446 aaPredicted RBP21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 BRPF3Q9ULD4 1205 aa21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 ANGEL1Q9UNK9 670 aaKnown RBP21.37■■□□□ 1.01
SMARCD3-202ENST00000356800 CLRN2A0PK11 232 aa21.36■■□□□ 1.01
SMARCD3-202ENST00000356800 MMP14P50281 582 aa21.36■■□□□ 1.01
SMARCD3-202ENST00000356800 SH3BP5LQ7L8J4 393 aa21.36■■□□□ 1.01
SMARCD3-202ENST00000356800 CCDC83Q8IWF9 413 aa21.36■■□□□ 1.01
SMARCD3-202ENST00000356800 WNT10BO00744 389 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 CDK8P49336 464 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 GABPAQ06546 454 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 STK3Q13188 491 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 NBPF9Q3BBW0 867 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 TMEM67Q5HYA8 995 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 FAM47AQ5JRC9 791 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 TTC6Q86TZ1 520 aa21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 CNOT7Q9UIV1 285 aaKnown RBP21.35■■□□□ 1.01
SMARCD3-202ENST00000356800 DDTLA6NHG4 134 aaPredicted RBP21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 IFIT3O14879 490 aaKnown RBP21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 RASA1P20936 1047 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 GPR162Q16538 588 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 C9orf131Q5VYM1 1079 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 GPC2Q8N158 579 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 MTA3Q9BTC8 594 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 ENTPD3O75355 529 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 PDIA3P30101 505 aaKnown RBP21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 SEC23AQ15436 765 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 ZNF274Q96GC6 653 aaPredicted RBP21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 MKNK2Q9HBH9 465 aa21.34■■□□□ 1.01
SMARCD3-202ENST00000356800 COL2A1P02458 1487 aaPredicted RBP21.33■■□□□ 1.01
SMARCD3-202ENST00000356800 CNTNAP1P78357 1384 aa21.33■■□□□ 1.01
SMARCD3-202ENST00000356800 KLF18A0A0U1RQI7 1052 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 TCP10L2B9ZVM9 353 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 PFKFB2O60825 505 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 LIFRP42702 1097 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 SAMD7Q7Z3H4 446 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 SGMS1Q86VZ5 419 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 GTF3C6Q969F1 213 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 TMOD2Q9NZR1 351 aa21.33■■□□□ 1
SMARCD3-202ENST00000356800 ATRNL1Q5VV63 1379 aa21.32■■□□□ 1
SMARCD3-202ENST00000356800 TNKSO95271 1327 aa21.32■■□□□ 1
SMARCD3-202ENST00000356800 DTNBO60941 627 aa21.32■■□□□ 1
SMARCD3-202ENST00000356800 SLURP2P0DP57 97 aa21.32■■□□□ 1
SMARCD3-202ENST00000356800 RBM26Q5T8P6 1007 aaKnown RBP21.32■■□□□ 1
SMARCD3-202ENST00000356800 ENAHQ8N8S7 591 aaPredicted RBP21.32■■□□□ 1
SMARCD3-202ENST00000356800 ZSCAN10Q96SZ4 725 aaPredicted RBP21.32■■□□□ 1
SMARCD3-202ENST00000356800 UBAC1Q9BSL1 405 aa21.32■■□□□ 1
SMARCD3-202ENST00000356800 DHX36Q9H2U1 1008 aaKnown RBP21.32■■□□□ 1
SMARCD3-202ENST00000356800 HPS5Q9UPZ3 1129 aa21.32■■□□□ 1
SMARCD3-202ENST00000356800 NMT2O60551 498 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 TFAP4Q01664 338 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 SCRN1Q12765 414 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 SART3Q15020 963 aaKnown RBP21.31■■□□□ 1
SMARCD3-202ENST00000356800 FKBP1CQ5VVH2 108 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 EHD4Q9H223 541 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 GPRC5DQ9NZD1 345 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 SERPINB13Q9UIV8 391 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 TSPY2A6NKD2 308 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 HLA-DOAP06340 250 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 NT5C2P49902 561 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 WTAPQ15007 396 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms