RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZFYVE28Q9HCC9 887 aa20.45■□□□□ 0.86
PDLIM7-201ENST00000355572 AFG3L2Q9Y4W6 797 aa20.45■□□□□ 0.86
PDLIM7-201ENST00000355572 SMARCA5O60264 1052 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 TBC1D12O60347 775 aa20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 TLR2O60603 784 aa20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 CHGBP05060 677 aa20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 ANKRD23Q86SG2 305 aa20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.44■□□□□ 0.862e-6■■■■■ 52.9
PDLIM7-201ENST00000355572 CPA4Q9UI42 421 aa20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 BAZ2AQ9UIF9 1905 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-201ENST00000355572 A0A0G2JLL6 359 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 PDHXO00330 501 aa20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 CTNND1O60716 968 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 EVX2Q03828 476 aa20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 PRRT2Q7Z6L0 340 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 ERO1AQ96HE7 468 aa20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 SAP30BPQ9UHR5 308 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 PALD1Q9ULE6 856 aa20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 PTPN22Q9Y2R2 807 aa20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 DOCK3Q8IZD9 2030 aa20.43■□□□□ 0.86
PDLIM7-201ENST00000355572 MAP4K4O95819 1239 aaPredicted RBP20.42■□□□□ 0.86
PDLIM7-201ENST00000355572 CYP2C8P10632 490 aa20.42■□□□□ 0.86
PDLIM7-201ENST00000355572 C17orf99Q6UX52 265 aa20.42■□□□□ 0.86
PDLIM7-201ENST00000355572 TNRC18O15417 2968 aaPredicted RBP20.42■□□□□ 0.86
PDLIM7-201ENST00000355572 CXCL11O14625 94 aa20.41■□□□□ 0.86
PDLIM7-201ENST00000355572 HSP90AB4PQ58FF6 505 aa20.41■□□□□ 0.86
PDLIM7-201ENST00000355572 CLASRPQ8N2M8 674 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-201ENST00000355572 RIOK1Q9BRS2 568 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-201ENST00000355572 EFCC1Q9HA90 598 aa20.41■□□□□ 0.86
PDLIM7-201ENST00000355572 ZCCHC17Q9NP64 241 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-201ENST00000355572 PICK1Q9NRD5 415 aa20.41■□□□□ 0.86
PDLIM7-201ENST00000355572 TRIM75PA6NK02 468 aa20.4■□□□□ 0.86
PDLIM7-201ENST00000355572 HMMRO75330 724 aa20.4■□□□□ 0.86
PDLIM7-201ENST00000355572 BAG3O95817 575 aa20.4■□□□□ 0.86
PDLIM7-201ENST00000355572 CAP2P40123 477 aa20.4■□□□□ 0.86
PDLIM7-201ENST00000355572 DNAJC2Q99543 621 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-201ENST00000355572 PTCH2Q9Y6C5 1203 aa20.4■□□□□ 0.86
PDLIM7-201ENST00000355572 TCRBV5S4A2TA0A5A2 114 aa20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 GOLIM4O00461 696 aa20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 RAB11FIP3O75154 756 aa20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 MLLT1Q03111 559 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 TREML2Q5T2D2 321 aa20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 GADL1Q6ZQY3 521 aa20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 METTL16Q86W50 562 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 NOL10Q9BSC4 688 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-201ENST00000355572 CENPFP49454 3210 aa20.38■□□□□ 0.85
PDLIM7-201ENST00000355572 MYH8P13535 1937 aa20.38■□□□□ 0.85
PDLIM7-201ENST00000355572 PDE6AP16499 860 aa20.38■□□□□ 0.85
PDLIM7-201ENST00000355572 LACTBP83111 547 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-201ENST00000355572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDLIM7-201ENST00000355572 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
PDLIM7-201ENST00000355572 PCDHB15Q9Y5E8 787 aa20.38■□□□□ 0.85
PDLIM7-201ENST00000355572 POTEFA5A3E0 1075 aa20.37■□□□□ 0.85
PDLIM7-201ENST00000355572 GDF11O95390 407 aa20.37■□□□□ 0.85
PDLIM7-201ENST00000355572 IFIT2P09913 472 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-201ENST00000355572 BCRP11274 1271 aa20.37■□□□□ 0.85
PDLIM7-201ENST00000355572 PLCG2P16885 1265 aa20.37■□□□□ 0.85
PDLIM7-201ENST00000355572 YTHDC1Q96MU7 727 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-201ENST00000355572 PI4KBQ9UBF8 816 aa20.37■□□□□ 0.85
PDLIM7-201ENST00000355572 ZNF532Q9HCE3 1301 aa20.36■□□□□ 0.85
PDLIM7-201ENST00000355572 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
PDLIM7-201ENST00000355572 SPP2Q13103 211 aa20.36■□□□□ 0.85
PDLIM7-201ENST00000355572 TRIM47Q96LD4 638 aa20.36■□□□□ 0.85
PDLIM7-201ENST00000355572 HERC5Q9UII4 1024 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-201ENST00000355572 PLXNB2O15031 1838 aa20.36■□□□□ 0.85
PDLIM7-201ENST00000355572 SMIM22K7EJ46 135 aa20.35■□□□□ 0.85
PDLIM7-201ENST00000355572 RRP1P56182 461 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-201ENST00000355572 TSHZ3Q63HK5 1081 aa20.35■□□□□ 0.85
PDLIM7-201ENST00000355572 LCORLQ8N3X6 602 aa20.35■□□□□ 0.85
PDLIM7-201ENST00000355572 DHX36Q9H2U1 1008 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-201ENST00000355572 ATP5JP18859 108 aa20.34■□□□□ 0.85
PDLIM7-201ENST00000355572 PLCD1P51178 756 aa20.34■□□□□ 0.85
PDLIM7-201ENST00000355572 SLC9C2Q5TAH2 1124 aa20.34■□□□□ 0.85
PDLIM7-201ENST00000355572 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
PDLIM7-201ENST00000355572 DCTPP1Q9H773 170 aa20.34■□□□□ 0.85
PDLIM7-201ENST00000355572 KIAA0100Q14667 2235 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 IGSF3O75054 1194 aa20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 HMGCS2P54868 508 aa20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 ZNF280CQ8ND82 737 aa20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 SDR42E1Q8WUS8 393 aa20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 ARMC5Q96C12 935 aa20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 HAUS7Q99871 368 aa20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 PAG1Q9NWQ8 432 aa20.33■□□□□ 0.85
PDLIM7-201ENST00000355572 BRCA2P51587 3418 aa20.33■□□□□ 0.84
PDLIM7-201ENST00000355572 USP17L5A8MUK1 530 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 PRKAB2O43741 272 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 PEX10O60683 326 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 CYP2D6P10635 497 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 ADD2P35612 726 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 PSMC4P43686 418 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 USP5P45974 858 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 FASTKD5Q7L8L6 764 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 FOXP4Q8IVH2 680 aaPredicted RBP20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 SH3TC2Q8TF17 1288 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 PARK7Q99497 189 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 ARMT1Q9H993 441 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 ZBTB21Q9ULJ3 1066 aa20.32■□□□□ 0.84
PDLIM7-201ENST00000355572 AGTPBP1Q9UPW5 1226 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms