RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PPP2R5DQ14738 602 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 TMTC1Q8IUR5 882 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 DDX27Q96GQ7 796 aaKnown RBP16.55■□□□□ 0.24
LMX1B-201ENST00000355497 TMEM87BQ96K49 555 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 PLEKHM2Q8IWE5 1019 aa16.55■□□□□ 0.24
LMX1B-201ENST00000355497 CUTAO60888 179 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 ZNF75DP51815 510 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 RNF10Q8N5U6 811 aaKnown RBP16.54■□□□□ 0.24
LMX1B-201ENST00000355497 DDX21Q9NR30 783 aaKnown RBP eCLIP16.54■□□□□ 0.24
LMX1B-201ENST00000355497 USTQ9Y2C2 406 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 IDI1Q13907 227 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 ELF2Q15723 593 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 SH2D4BQ5SQS7 431 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 PNMA8AQ86V59 439 aaPredicted RBP16.54■□□□□ 0.24
LMX1B-201ENST00000355497 CCDC125Q86Z20 511 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 NLRP12P59046 1061 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 BEND3Q5T5X7 828 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 NSFL1CQ9UNZ2 370 aaKnown RBP16.54■□□□□ 0.24
LMX1B-201ENST00000355497 SOS1Q07889 1333 aaPredicted RBP16.54■□□□□ 0.24
LMX1B-201ENST00000355497 ARHGEF35A5YM69 484 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 MLKLQ8NB16 471 aa16.54■□□□□ 0.24
LMX1B-201ENST00000355497 CACYBPQ9HB71 228 aaKnown RBP16.54■□□□□ 0.24
LMX1B-201ENST00000355497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
LMX1B-201ENST00000355497 DKC1O60832 514 aaKnown RBP eCLIP16.53■□□□□ 0.24
LMX1B-201ENST00000355497 KRT15P19012 456 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
LMX1B-201ENST00000355497 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
LMX1B-201ENST00000355497 RABEP2Q9H5N1 569 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 PARP3Q9Y6F1 533 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 CFAP221Q4G0U5 840 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 RBSNQ9H1K0 784 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 BCAP29Q9UHQ4 241 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 NSMCE1Q8WV22 266 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 HAUS2Q9NVX0 235 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 MAPK8IP1Q9UQF2 711 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 CNGA1P29973 690 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 PPFIA1Q13136 1202 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 DCUN1D2Q6PH85 259 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 CCDC105Q8IYK2 499 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 MAIP1Q8WWC4 291 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 BICC1Q9H694 974 aaKnown RBP16.53■□□□□ 0.24
LMX1B-201ENST00000355497 B4E1Z4 1266 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 TXKP42681 527 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 PPP2R5CQ13362 524 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 NCAPH2Q6IBW4 605 aa16.53■□□□□ 0.24
LMX1B-201ENST00000355497 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
LMX1B-201ENST00000355497 GABPB1Q06547 395 aaPredicted RBP16.52■□□□□ 0.24
LMX1B-201ENST00000355497 TEX11Q8IYF3 940 aa16.52■□□□□ 0.24
LMX1B-201ENST00000355497 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
LMX1B-201ENST00000355497 RSPH3Q86UC2 560 aa16.52■□□□□ 0.24
LMX1B-201ENST00000355497 RBM17Q96I25 401 aaKnown RBP16.52■□□□□ 0.24
LMX1B-201ENST00000355497 PPIP5K1Q6PFW1 1433 aa16.52■□□□□ 0.24
LMX1B-201ENST00000355497 LONRF3Q496Y0 759 aa16.52■□□□□ 0.24
LMX1B-201ENST00000355497 TTC38Q5R3I4 469 aa16.52■□□□□ 0.24
LMX1B-201ENST00000355497 CASC4Q6P4E1 433 aa16.52■□□□□ 0.24
LMX1B-201ENST00000355497 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.24
LMX1B-201ENST00000355497 DENND2CQ68D51 928 aa16.52■□□□□ 0.23
LMX1B-201ENST00000355497 PARP2Q9UGN5 583 aa16.52■□□□□ 0.23
LMX1B-201ENST00000355497 PPFIA4O75335 1185 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 FBLN1P23142 703 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 MAGEA1P43355 309 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 RPS6KA1Q15418 735 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 FLOT1O75955 427 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 ECM2O94769 699 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-201ENST00000355497 JAG2Q9Y219 1238 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 SLC27A2O14975 620 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 BCRP11274 1271 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 STMN1P16949 149 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 OAS2P29728 719 aaKnown RBP16.51■□□□□ 0.23
LMX1B-201ENST00000355497 SFMBT2Q5VUG0 894 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 ANKRD20A3Q5VUR7 823 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 VPS37BQ9H9H4 285 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 ARHGEF10LQ9HCE6 1279 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 CCDC89Q8N998 374 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 CBX8Q9HC52 389 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 TAB2Q9NYJ8 693 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 TBC1D8O95759 1140 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 RASSF2P50749 326 aa16.51■□□□□ 0.23
LMX1B-201ENST00000355497 ARHGAP6O43182 974 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 KLHL30Q0D2K2 578 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
LMX1B-201ENST00000355497 RILPQ96NA2 401 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
LMX1B-201ENST00000355497 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 GSDMBQ8TAX9 411 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 MAP3K5Q99683 1374 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
LMX1B-201ENST00000355497 PEX26Q7Z412 305 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 P3H4Q92791 437 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 TRIM6Q9C030 488 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-201ENST00000355497 VCX3AQ9NNX9 186 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 TMOD4Q9NZQ9 345 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 CPA1P15085 419 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 SND1Q7KZF4 910 aaKnown RBP eCLIP16.5■□□□□ 0.23
LMX1B-201ENST00000355497 ATP2A3Q93084 1043 aa16.5■□□□□ 0.23
LMX1B-201ENST00000355497 RNF40O75150 1001 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms