RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 TGFB2P61812 414 aa26.72■■□□□ 1.87
SCAMP3-202ENST00000355379 KLHL40Q2TBA0 621 aa26.72■■□□□ 1.87
SCAMP3-202ENST00000355379 IQCA1Q86XH1 822 aa26.72■■□□□ 1.87
SCAMP3-202ENST00000355379 ZSCAN10Q96SZ4 725 aaPredicted RBP26.72■■□□□ 1.87
SCAMP3-202ENST00000355379 MTFR1LQ9H019 292 aa26.72■■□□□ 1.87
SCAMP3-202ENST00000355379 H3BQV1 296 aa26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 C21orf2O43822 256 aa26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 RANBP6O60518 1105 aaKnown RBP26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 FDPSP14324 419 aaKnown RBP26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 IFFO2Q5TF58 517 aa26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 CHAMP1Q96JM3 812 aa26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 ZKSCAN3Q9BRR0 538 aa26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 TNKSO95271 1327 aa26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 MYH15Q9Y2K3 1946 aa26.71■■□□□ 1.87
SCAMP3-202ENST00000355379 GOLGA8AA7E2F4 631 aa26.7■■□□□ 1.87
SCAMP3-202ENST00000355379 POLD1P28340 1107 aa26.7■■□□□ 1.87
SCAMP3-202ENST00000355379 PSMD1Q99460 953 aa26.7■■□□□ 1.87
SCAMP3-202ENST00000355379 ZSCAN16Q9H4T2 348 aaPredicted RBP26.7■■□□□ 1.87
SCAMP3-202ENST00000355379 USP17L3A6NCW0 530 aa26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 USP17L4A6NCW7 530 aa26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 HDLBPQ00341 1268 aaKnown RBP26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 AOC3Q16853 763 aa26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 DACT2Q5SW24 774 aa26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 USP17L1Q7RTZ2 530 aa26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 MAPKAPK5Q8IW41 473 aa26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 VPS33BQ9H267 617 aa26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 DDX49Q9Y6V7 483 aaKnown RBP26.7■■□□□ 1.86
SCAMP3-202ENST00000355379 EVX2Q03828 476 aa26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 PPP2R5BQ15173 497 aa26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 CSPP1Q1MSJ5 1256 aa26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 SOGA3Q5TF21 947 aa26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 MICU3Q86XE3 530 aa26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 RAB11FIP4Q86YS3 637 aa26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 FAM217BQ9NTX9 383 aaPredicted RBP26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 ORC3Q9UBD5 711 aaPredicted RBP26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 FLT1P17948 1338 aa26.69■■□□□ 1.86
SCAMP3-202ENST00000355379 PRDM1O75626 825 aa26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 ZBTB7AO95365 584 aa26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 POLR3DP05423 398 aaPredicted RBP26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 CDC27P30260 824 aa26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 ADD1P35611 737 aaKnown RBP26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 RESTQ13127 1097 aa26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 ZNF654Q8IZM8 581 aa26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 ENAHQ8N8S7 591 aaPredicted RBP26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 TEKT1Q969V4 418 aa26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 MXD3Q9BW11 206 aa26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 BRCA1P38398 1863 aaKnown RBP26.68■■□□□ 1.86
SCAMP3-202ENST00000355379 ADAMTSL1Q8N6G6 1762 aa26.67■■□□□ 1.86
SCAMP3-202ENST00000355379 F8W031 263 aaPredicted RBP26.67■■□□□ 1.86
SCAMP3-202ENST00000355379 NTRK3Q16288 839 aa26.67■■□□□ 1.86
SCAMP3-202ENST00000355379 ZNF287Q9HBT7 754 aa26.67■■□□□ 1.86
SCAMP3-202ENST00000355379 CCDC196A0A1B0GTZ2 297 aa26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 PPIP5K2O43314 1243 aa26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 FOXD4L6Q3SYB3 417 aaPredicted RBP26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 CCDC178Q5BJE1 867 aa26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 FOXD4L3Q6VB84 417 aaPredicted RBP26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 KCNQ5Q9NR82 932 aa26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 CNPY2Q9Y2B0 182 aa26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 STK36Q9NRP7 1315 aa26.66■■□□□ 1.86
SCAMP3-202ENST00000355379 MBD3O95983 291 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 RTN1Q16799 776 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 IFIT1BQ5T764 474 aaKnown RBP26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 USP48Q86UV5 1035 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 CALM1P0DP23 149 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 CALM2P0DP24 149 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 CALM3P0DP25 149 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 RXRAP19793 462 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 DNM1Q05193 864 aaKnown RBP26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 FERMT3Q86UX7 667 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 ZDHHC15Q96MV8 337 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 PIM2Q9P1W9 311 aa26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 SAP30BPQ9UHR5 308 aaKnown RBP26.65■■□□□ 1.86
SCAMP3-202ENST00000355379 TSPY2A6NKD2 308 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 IFNAR1P17181 557 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 CRKP46108 304 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 PLCD1P51178 756 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 KRT85P78386 507 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 C16orf86Q6ZW13 317 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 MYL10Q9BUA6 226 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 MKNK2Q9HBH9 465 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 TCP11L1Q9NUJ3 509 aa26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 ATF5Q9Y2D1 282 aaPredicted RBP26.64■■□□□ 1.85
SCAMP3-202ENST00000355379 IARSP41252 1262 aaKnown RBP26.63■■□□□ 1.85
SCAMP3-202ENST00000355379 CATIPQ7Z7H3 387 aa26.63■■□□□ 1.85
SCAMP3-202ENST00000355379 FANCBQ8NB91 859 aa26.63■■□□□ 1.85
SCAMP3-202ENST00000355379 ANKS1AQ92625 1134 aa26.63■■□□□ 1.85
SCAMP3-202ENST00000355379 DYNLL2Q96FJ2 89 aa26.63■■□□□ 1.85
SCAMP3-202ENST00000355379 USP40Q9NVE5 1235 aa26.63■■□□□ 1.85
SCAMP3-202ENST00000355379 DDAH1O94760 285 aa26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 NCLP19338 710 aaKnown RBP26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 SCNN1DP51172 638 aa26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 FAM47AQ5JRC9 791 aa26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 APOBEC3HQ6NTF7 200 aaKnown RBP26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 CCDC144CPQ8IYA2 1237 aa26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 GPT2Q8TD30 523 aa26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 C8orf76Q96K31 380 aa26.62■■□□□ 1.85
SCAMP3-202ENST00000355379 FMNL1O95466 1100 aaPredicted RBP26.61■■□□□ 1.85
SCAMP3-202ENST00000355379 TFAP4Q01664 338 aa26.61■■□□□ 1.85
SCAMP3-202ENST00000355379 SSRP1Q08945 709 aaKnown RBP26.61■■□□□ 1.85
SCAMP3-202ENST00000355379 CDC42EP5Q6NZY7 148 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms