RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 ZMYM6O95789 1325 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 ABCC6O95255 1503 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 LOC102724428A0A0B4J2F2 783 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 CYP2D6P10635 497 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 ADKP55263 362 aaKnown RBP15.86■□□□□ 0.13
EBF3-201ENST00000355311 SIK1P57059 783 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 UBASH3AP57075 661 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 GABPB1Q06547 395 aaPredicted RBP15.86■□□□□ 0.13
EBF3-201ENST00000355311 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 INTS5Q6P9B9 1019 aaKnown RBP15.86■□□□□ 0.13
EBF3-201ENST00000355311 IPO4Q8TEX9 1081 aaKnown RBP15.86■□□□□ 0.13
EBF3-201ENST00000355311 EPSTI1Q96J88 318 aa15.86■□□□□ 0.13
EBF3-201ENST00000355311 NAT10Q9H0A0 1025 aaKnown RBP15.86■□□□□ 0.13
EBF3-201ENST00000355311 CTAGE5O15320 804 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 BMP6P22004 513 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 TOB1P50616 345 aaPredicted RBP15.85■□□□□ 0.13
EBF3-201ENST00000355311 ZNF174Q15697 407 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 METTL16Q86W50 562 aaKnown RBP15.85■□□□□ 0.13
EBF3-201ENST00000355311 GPIHBP1Q8IV16 184 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
EBF3-201ENST00000355311 TEX13AQ9BXU3 409 aaPredicted RBP15.85■□□□□ 0.13
EBF3-201ENST00000355311 POLR3EQ9NVU0 708 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 AATFQ9NY61 560 aaKnown RBP eCLIP15.85■□□□□ 0.13
EBF3-201ENST00000355311 KCNH3Q9ULD8 1083 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 RTN1Q16799 776 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 DHX58Q96C10 678 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 TIGD1Q96MW7 591 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 UBAC1Q9BSL1 405 aa15.85■□□□□ 0.13
EBF3-201ENST00000355311 PDIA4P13667 645 aaKnown RBP15.84■□□□□ 0.13
EBF3-201ENST00000355311 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
EBF3-201ENST00000355311 CPVLQ9H3G5 476 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 ERICH2A1L162 156 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 NCAPHQ15003 741 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 UBE3CQ15386 1083 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 FAM98CQ17RN3 349 aaKnown RBP15.84■□□□□ 0.13
EBF3-201ENST00000355311 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
EBF3-201ENST00000355311 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 ZSWIM4Q9H7M6 989 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 ZNF446Q9NWS9 450 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 TAF3Q5VWG9 929 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 RASGRP2Q7LDG7 609 aa15.84■□□□□ 0.13
EBF3-201ENST00000355311 SFPQP23246 707 aaKnown RBP eCLIP15.83■□□□□ 0.12
EBF3-201ENST00000355311 PTPAQ15257 358 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 E4F1Q66K89 784 aaPredicted RBP15.83■□□□□ 0.12
EBF3-201ENST00000355311 ZNF34Q8IZ26 560 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 SHISA4Q96DD7 197 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 SAMSN1Q9NSI8 373 aaKnown RBP15.83■□□□□ 0.12
EBF3-201ENST00000355311 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 TPM3P06753 285 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 CMA1P23946 247 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 NLRP12P59046 1061 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 FMR1Q06787 632 aaKnown RBP eCLIP15.83■□□□□ 0.12
EBF3-201ENST00000355311 TXNRD3Q86VQ6 643 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 DESI2Q9BSY9 194 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 BLZF1Q9H2G9 400 aa15.83■□□□□ 0.12
EBF3-201ENST00000355311 USP17L12C9JPN9 530 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 USP17L21D6R901 530 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
EBF3-201ENST00000355311 YEATS4O95619 227 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 ERCC6LQ2NKX8 1250 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 BRAPQ7Z569 592 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 RASGRP4Q8TDF6 673 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 TNKSO95271 1327 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 A0A0U1RQJ8 604 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 FGFR2P21802 821 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 HNRNPH2P55795 449 aaKnown RBP15.82■□□□□ 0.12
EBF3-201ENST00000355311 EVCP57679 992 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 CCAR2Q8N163 923 aaKnown RBP15.82■□□□□ 0.12
EBF3-201ENST00000355311 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.82■□□□□ 0.12
EBF3-201ENST00000355311 ATRIPQ8WXE1 791 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 MRFAP1L1Q96HT8 127 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 MAP3K14Q99558 947 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 PLA2G12BQ9BX93 195 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 DNAI1Q9UI46 699 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 RFX7Q2KHR2 1363 aa15.82■□□□□ 0.12
EBF3-201ENST00000355311 PRDX5P30044 214 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 EIF5P55010 431 aaKnown RBP15.81■□□□□ 0.12
EBF3-201ENST00000355311 PPARAQ07869 468 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 NOSTRINQ8IVI9 506 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 ZNF654Q8IZM8 581 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 CSRNP2Q9H175 543 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 HSD3B7Q9H2F3 369 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 UQCRFS1P1P0C7P4 283 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 NEK11Q8NG66 645 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 IRX2Q9BZI1 471 aaPredicted RBP15.81■□□□□ 0.12
EBF3-201ENST00000355311 TAF1P21675 1872 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 GLI3P10071 1580 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 CCDC66A2RUB6 948 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 ARID4AP29374 1257 aaPredicted RBP15.81■□□□□ 0.12
EBF3-201ENST00000355311 SAFBQ15424 915 aaKnown RBP eCLIP15.81■□□□□ 0.12
EBF3-201ENST00000355311 CCDC152Q4G0S7 254 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 TRIM22Q8IYM9 498 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 FANCBQ8NB91 859 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 NACAP1Q9BZK3 213 aa15.81■□□□□ 0.12
EBF3-201ENST00000355311 MAGEB6P1A0A0J9YX57 407 aa15.8■□□□□ 0.12
EBF3-201ENST00000355311 A0A1W2PQ27 194 aa15.8■□□□□ 0.12
EBF3-201ENST00000355311 A0A1W2PQ64 194 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms