RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 MKRN3Q13064 507 aaKnown RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 EP400NLQ6ZTU2 488 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 RSPH3Q86UC2 560 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 TTC37Q6PGP7 1564 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 SERPINB2P05120 415 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 TEDDM1Q5T9Z0 273 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 TERB1Q8NA31 727 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 IFT81Q8WYA0 676 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 MAK16Q9BXY0 300 aaKnown RBP8.9□□□□□ -0.98
HTT-201ENST00000355072 RBSNQ9H1K0 784 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 SECISBP2LQ93073 1101 aaKnown RBP8.9□□□□□ -0.98
HTT-201ENST00000355072 MRPS9P82933 396 aaKnown RBP8.9□□□□□ -0.98
HTT-201ENST00000355072 NCBP1Q09161 790 aaKnown RBP8.9□□□□□ -0.98
HTT-201ENST00000355072 UBLCP1Q8WVY7 318 aaPredicted RBP8.9□□□□□ -0.98
HTT-201ENST00000355072 ESR2Q92731 530 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 IWS1Q96ST2 819 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 ABCF3Q9NUQ8 709 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 BTBD11A6QL63 1104 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 KCNJ6P48051 423 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 TMED1Q13445 227 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 BIRC3Q13489 604 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 HSPA6P17066 643 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 SMTNP53814 917 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 YWHAEP62258 255 aaKnown RBP8.9□□□□□ -0.98
HTT-201ENST00000355072 ITIH3Q06033 890 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 RGS12O14924 1447 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 STK3Q13188 491 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 EMBQ6PCB8 327 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 TEKT2Q9UIF3 430 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 ANGPTL2Q9UKU9 493 aa8.9□□□□□ -0.98
HTT-201ENST00000355072 TMEM57Q8N5G2 664 aa8.9□□□□□ -0.99
HTT-201ENST00000355072 DIABLOQ9NR28 239 aa8.9□□□□□ -0.99
HTT-201ENST00000355072 TRPM2O94759 1503 aa8.9□□□□□ -0.99
HTT-201ENST00000355072 COL17A1Q9UMD9 1497 aaPredicted RBP8.9□□□□□ -0.99
HTT-201ENST00000355072 PRPF38AQ8NAV1 312 aaKnown RBP8.9□□□□□ -0.99
HTT-201ENST00000355072 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.9□□□□□ -0.99
HTT-201ENST00000355072 PRPF40BQ6NWY9 871 aaKnown RBP8.9□□□□□ -0.99
HTT-201ENST00000355072 KDM2BQ8NHM5 1336 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 IFIT5Q13325 482 aaKnown RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 C6orf118Q5T5N4 469 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 IFIH1Q9BYX4 1025 aaKnown RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 CTNNA1P35221 906 aaKnown RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 C6orf50Q9HD87 102 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 RGS16O15492 202 aaPredicted RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 TMPOP42166 694 aaKnown RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 CCDC89Q8N998 374 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 NT5C3AQ9H0P0 336 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 CCDC186Q7Z3E2 898 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 KDM3AQ9Y4C1 1321 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 TEX9Q8N6V9 391 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 KIF9Q9HAQ2 790 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 TRIM11Q96F44 468 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 EDEM3Q9BZQ6 932 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 PCP11498 1178 aaKnown RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 DDX41Q9UJV9 622 aaKnown RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 JRKLQ9Y4A0 524 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 ELL2O00472 640 aaPredicted RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 HMOX1P09601 288 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 YEATS2Q9ULM3 1422 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 FRMD3A2A2Y4 597 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 RUFY3Q7L099 469 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 CRACR2BQ8N4Y2 399 aaPredicted RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 SPC25Q9HBM1 224 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 GIMAP4Q9NUV9 329 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 LRRIQ1Q96JM4 1722 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 CUL4BQ13620 913 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 PLCB4Q15147 1175 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 NBPF6Q5VWK0 638 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 VSIG1Q86XK7 387 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 NBPF4Q96M43 638 aa8.89□□□□□ -0.99
HTT-201ENST00000355072 TRMT1Q9NXH9 659 aaKnown RBP8.89□□□□□ -0.99
HTT-201ENST00000355072 SELENOSQ9BQE4 189 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 DIS3Q9Y2L1 958 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 LAD1O00515 517 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 ALDH1L1O75891 902 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 LDHCP07864 332 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 ENAHQ8N8S7 591 aaPredicted RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 STAMBPL1Q96FJ0 436 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 TOPBP1Q92547 1522 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 HARSP12081 509 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 CDC42BPBQ9Y5S2 1711 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 E7EVH7 732 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 CCDC63Q8NA47 563 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 URB2Q14146 1524 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 GUCA1BQ9UMX6 200 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 STX2P32856 288 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 KPNA2P52292 529 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 ST13P4Q8IZP2 240 aaPredicted RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 VPS37BQ9H9H4 285 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 LRRC8BQ6P9F7 803 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 USP48Q86UV5 1035 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 EPB41P11171 864 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 SENP1Q9P0U3 644 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 TPX2Q9ULW0 747 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 ARHGAP42A6NI28 874 aa8.88□□□□□ -0.99
HTT-201ENST00000355072 UQCRFS1P1P0C7P4 283 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms