RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 LRP6O75581 1613 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 POLR3GO15318 223 aaPredicted RBP13.04□□□□□ -0.32
CAPN9-202ENST00000354537 MMP1P03956 469 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 FECHP22830 423 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 SCARF1Q14162 830 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 MSANTD4Q8NCY6 345 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
CAPN9-202ENST00000354537 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 CNNM2Q9H8M5 875 aa13.04□□□□□ -0.32
CAPN9-202ENST00000354537 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
CAPN9-202ENST00000354537 CSB-PGBD3P0DP91 1061 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 LONRF2Q1L5Z9 754 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 DHX58Q96C10 678 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 CDC23Q9UJX2 597 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 PAPPAQ13219 1627 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 ERLIN1O75477 346 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 FMR1Q06787 632 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN9-202ENST00000354537 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
CAPN9-202ENST00000354537 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 KIF5CO60282 957 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 PBX1P40424 430 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 ADKP55263 362 aaKnown RBP13.02□□□□□ -0.32
CAPN9-202ENST00000354537 CHMP4BP1P59074 171 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 GOLGA8FQ08AF8 430 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 GOLGA8DPQ0D2H9 430 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 IFIT5Q13325 482 aaKnown RBP13.02□□□□□ -0.32
CAPN9-202ENST00000354537 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.32
CAPN9-202ENST00000354537 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 SPATA1Q5VX52 437 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.32
CAPN9-202ENST00000354537 PHKBQ93100 1093 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 MYO1AQ9UBC5 1043 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 SLC12A7Q9Y666 1083 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 ITIH6Q6UXX5 1313 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 CDHR2Q9BYE9 1310 aa13.02□□□□□ -0.32
CAPN9-202ENST00000354537 ACTN4O43707 911 aaKnown RBP13.02□□□□□ -0.33
CAPN9-202ENST00000354537 TOB1P50616 345 aaPredicted RBP13.02□□□□□ -0.33
CAPN9-202ENST00000354537 SLC9C2Q5TAH2 1124 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 NFXL1Q6ZNB6 911 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 HDXQ7Z353 690 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
CAPN9-202ENST00000354537 KRT23Q9C075 422 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 GBP3Q9H0R5 595 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 SERTAD1Q9UHV2 236 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 RIPOR2Q9Y4F9 1068 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
CAPN9-202ENST00000354537 CCDC196A0A1B0GTZ2 297 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 MCAMP43121 646 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 TMTC2Q8N394 836 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 ZBTB3Q9H5J0 574 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 TNS2Q63HR2 1409 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 PATL2C9JE40 543 aaKnown RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 FOXN1O15353 648 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 CAPN2P17655 700 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 PPP2R5BQ15173 497 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 APTXQ7Z2E3 356 aaKnown RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 DIS3L2Q8IYB7 885 aaKnown RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 ZBTB38Q8NAP3 1195 aaPredicted RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 STRBPQ96SI9 672 aaKnown RBP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 SLC26A6Q9BXS9 759 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 AATFQ9NY61 560 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAPN9-202ENST00000354537 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 TIAM2Q8IVF5 1701 aa13.01□□□□□ -0.33
CAPN9-202ENST00000354537 B4E1Z4 1266 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 RPS6KA5O75582 802 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 DEXIO95424 95 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 A1BGP04217 495 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
CAPN9-202ENST00000354537 ST5P78524 1137 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 ZSCAN26Q16670 478 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 FILIP1LQ4L180 1135 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 BEND6Q5SZJ8 279 aaPredicted RBP13□□□□□ -0.33
CAPN9-202ENST00000354537 CDKAL1Q5VV42 579 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 SH3RF1Q7Z6J0 888 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 CNGA4Q8IV77 575 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 MED15Q96RN5 788 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 MRPL44Q9H9J2 332 aaKnown RBP13□□□□□ -0.33
CAPN9-202ENST00000354537 ADAM21Q9UKJ8 722 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 IQSEC3Q9UPP2 1182 aaPredicted RBP13□□□□□ -0.33
CAPN9-202ENST00000354537 A0A0U1RQG5 324 aaPredicted RBP13□□□□□ -0.33
CAPN9-202ENST00000354537 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
CAPN9-202ENST00000354537 BTBD18B2RXH4 712 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms