RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 SEC23AQ15436 765 aa25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 FOXD4L5Q5VV16 416 aaPredicted RBP25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 KIAA0825Q8IV33 1275 aa25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 FOXD4L4Q8WXT5 416 aaPredicted RBP25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 MTMR6Q9Y217 621 aa25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 NID2Q14112 1375 aa25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 WTAPQ15007 396 aa25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 LARP1BQ659C4 914 aaKnown RBP25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 APOBEC3HQ6NTF7 200 aaKnown RBP25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 ZDHHC15Q96MV8 337 aa25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 UBAC1Q9BSL1 405 aa25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 PPP1R1BQ9UD71 204 aaPredicted RBP25.33■■□□□ 1.65
PRKAA1-202ENST00000354209 FER1L6Q2WGJ9 1857 aa25.33■■□□□ 1.64
PRKAA1-202ENST00000354209 TNKSO95271 1327 aa25.32■■□□□ 1.64
PRKAA1-202ENST00000354209 ERICH2A1L162 156 aa25.32■■□□□ 1.64
PRKAA1-202ENST00000354209 RANBP6O60518 1105 aaKnown RBP25.32■■□□□ 1.64
PRKAA1-202ENST00000354209 LARGE2Q8N3Y3 721 aa25.32■■□□□ 1.64
PRKAA1-202ENST00000354209 DHX16O60231 1041 aaKnown RBP25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 SLC4A8Q2Y0W8 1093 aa25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 NFXL1Q6ZNB6 911 aa25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 TMTC2Q8N394 836 aa25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 SAP30BPQ9UHR5 308 aaKnown RBP25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 CCDC69A6NI79 296 aa25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 WDHD1O75717 1129 aaPredicted RBP25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 PLCD1P51178 756 aa25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 RAB11FIP4Q86YS3 637 aa25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 ZSCAN10Q96SZ4 725 aaPredicted RBP25.31■■□□□ 1.64
PRKAA1-202ENST00000354209 ZBTB43O43298 467 aa25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 POLR3DP05423 398 aaPredicted RBP25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 METAP2P50579 478 aaKnown RBP eCLIP25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 CDC42EP5Q6NZY7 148 aa25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 DDX11Q96FC9 970 aa25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 SLC12A7Q9Y666 1083 aa25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 MYH1P12882 1939 aa25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 GOLGB1Q14789 3259 aaKnown RBP25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 ECM29Q5VYK3 1845 aa25.3■■□□□ 1.64
PRKAA1-202ENST00000354209 F13A1P00488 732 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 IQCA1Q86XH1 822 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 DYNLL2Q96FJ2 89 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 USP40Q9NVE5 1235 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 SERPINA10Q9UK55 444 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 IARSP41252 1262 aaKnown RBP25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 RCAN1P53805 252 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 MICU3Q86XE3 530 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 KLHL34Q8N239 644 aa25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 ENAHQ8N8S7 591 aaPredicted RBP25.29■■□□□ 1.64
PRKAA1-202ENST00000354209 MYO3BQ8WXR4 1341 aa25.28■■□□□ 1.64
PRKAA1-202ENST00000354209 VPS37CA5D8V6 355 aaPredicted RBP25.28■■□□□ 1.64
PRKAA1-202ENST00000354209 FAM184AQ8NB25 1140 aa25.28■■□□□ 1.64
PRKAA1-202ENST00000354209 DDX4Q9NQI0 724 aaKnown RBP25.28■■□□□ 1.64
PRKAA1-202ENST00000354209 KIF3AQ9Y496 699 aa25.28■■□□□ 1.64
PRKAA1-202ENST00000354209 C16orf86Q6ZW13 317 aa25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 TAOK3Q9H2K8 898 aa25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 GOLGA8AA7E2F4 631 aa25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 GOLGA6L22H0YM25 854 aa25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 VIL1P09327 827 aaKnown RBP25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 RXRAP19793 462 aa25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 RSBN1LQ6PCB5 846 aaPredicted RBP25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 CDC37L1Q7L3B6 337 aa25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 MYL10Q9BUA6 226 aa25.27■■□□□ 1.64
PRKAA1-202ENST00000354209 NFKBIEO00221 500 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 CPLX1O14810 134 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 FDPSP14324 419 aaKnown RBP25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 PTMSP20962 102 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 CDC27P30260 824 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 FAM47AQ5JRC9 791 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 MCTP1Q6DN14 999 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 SYNE3Q6ZMZ3 975 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 NIM1KQ8IY84 436 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 FAM217BQ9NTX9 383 aaPredicted RBP25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 PCDHAC2Q9Y5I4 1007 aa25.26■■□□□ 1.63
PRKAA1-202ENST00000354209 TSPY2A6NKD2 308 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 PICALMQ13492 652 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 ZNF654Q8IZM8 581 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 CHAMP1Q96JM3 812 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 ZNRF3Q9ULT6 936 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 PSMD14O00487 310 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 RAD17O75943 681 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 ADD1P35611 737 aaKnown RBP25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 SLC44A5Q8NCS7 719 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 GMLQ99445 158 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 ZNF287Q9HBT7 754 aa25.25■■□□□ 1.63
PRKAA1-202ENST00000354209 NTRK3Q16288 839 aa25.24■■□□□ 1.63
PRKAA1-202ENST00000354209 IFIT1BQ5T764 474 aaKnown RBP25.24■■□□□ 1.63
PRKAA1-202ENST00000354209 OSBPL5Q9H0X9 879 aaPredicted RBP25.24■■□□□ 1.63
PRKAA1-202ENST00000354209 MKNK2Q9HBH9 465 aa25.24■■□□□ 1.63
PRKAA1-202ENST00000354209 BCS1LQ9Y276 419 aa25.24■■□□□ 1.63
PRKAA1-202ENST00000354209 RASA1P20936 1047 aa25.24■■□□□ 1.63
PRKAA1-202ENST00000354209 LTBP3Q9NS15 1303 aa25.23■■□□□ 1.63
PRKAA1-202ENST00000354209 CDKL5O76039 1030 aa25.23■■□□□ 1.63
PRKAA1-202ENST00000354209 CDK8P49336 464 aa25.23■■□□□ 1.63
PRKAA1-202ENST00000354209 TFAP4Q01664 338 aa25.23■■□□□ 1.63
PRKAA1-202ENST00000354209 CCDC144CPQ8IYA2 1237 aa25.23■■□□□ 1.63
PRKAA1-202ENST00000354209 ATP6V1DQ9Y5K8 247 aa25.23■■□□□ 1.63
PRKAA1-202ENST00000354209 ARFGEF1Q9Y6D6 1849 aa25.22■■□□□ 1.63
PRKAA1-202ENST00000354209 NMT2O60551 498 aa25.22■■□□□ 1.63
PRKAA1-202ENST00000354209 PPFIA3O75145 1194 aa25.22■■□□□ 1.63
PRKAA1-202ENST00000354209 RBM5P52756 815 aaKnown RBP eCLIP25.22■■□□□ 1.63
PRKAA1-202ENST00000354209 NFIAQ12857 509 aa25.22■■□□□ 1.63
PRKAA1-202ENST00000354209 CPLX2Q6PUV4 134 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms