RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PYGBP11216 843 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 HSP90AB2PQ58FF8 381 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 FUKQ8N0W3 1084 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 FMR1NBQ8N0W7 255 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-203ENST00000349748 SLC35F6Q8N357 371 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 MAB21L3Q8N8X9 362 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 RSRC1Q96IZ7 334 aaKnown RBP12.06□□□□□ -0.48
CAPN3-203ENST00000349748 ZCWPW1Q9H0M4 648 aa12.06□□□□□ -0.48
CAPN3-203ENST00000349748 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-203ENST00000349748 GOLGA6BA6NDN3 693 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 STX10O60499 249 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 UPP2O95045 317 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 SPRED3Q2MJR0 410 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 KIAA1328Q86T90 577 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
CAPN3-203ENST00000349748 TAF6LQ9Y6J9 622 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 ATXN2Q99700 1313 aaKnown RBP12.05□□□□□ -0.48
CAPN3-203ENST00000349748 CTAGE9A4FU28 777 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 RANBP1P43487 201 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 SH3GL2Q99962 352 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 MYO6Q9UM54 1294 aa12.05□□□□□ -0.48
CAPN3-203ENST00000349748 KIF4AO95239 1232 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 CCDC175P0C221 793 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 PRPHP41219 470 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 SF3A1Q15459 793 aaKnown RBP12.04□□□□□ -0.48
CAPN3-203ENST00000349748 NAA35Q5VZE5 725 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 BZW1Q7L1Q6 419 aaKnown RBP12.04□□□□□ -0.48
CAPN3-203ENST00000349748 NSMCE1Q8WV22 266 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 PRDM16Q9HAZ2 1276 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 ATP7BP35670 1465 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 GNAI2P04899 355 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 NLRP12P59046 1061 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 PPARDQ03181 441 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 MYO1EQ12965 1108 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 ANKRD23Q86SG2 305 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 CCDC148Q8NFR7 591 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 SELENOOQ9BVL4 669 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 TM6SF1Q9BZW5 370 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 ZNF232Q9UNY5 417 aa12.04□□□□□ -0.48
CAPN3-203ENST00000349748 CBFA2T2O43439 604 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 RASSF8Q8NHQ8 419 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 EZH1Q92800 747 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 STAMBPL1Q96FJ0 436 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 STK31Q9BXU1 1019 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 RIPOR2Q9Y4F9 1068 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 NEDD4P46934 1319 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 RTN3O95197 1032 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 SLC3A2P08195 630 aaKnown RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 ZKSCAN1P17029 563 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 LAMB3Q13751 1172 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 MIS18BP1Q6P0N0 1132 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 SH2D3CQ8N5H7 860 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 MRPS27Q92552 414 aaKnown RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 CHCHD3Q9NX63 227 aaKnown RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 EIF4E1BA6NMX2 242 aaKnown RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 PPFIA2O75334 1257 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 SEC24CP53992 1094 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-203ENST00000349748 RAD9BQ6WBX8 426 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 ARL8AQ96BM9 186 aa12.03□□□□□ -0.48
CAPN3-203ENST00000349748 ATP2C2O75185 946 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 PIP4K2BP78356 416 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.49
CAPN3-203ENST00000349748 GUCY1B3Q02153 619 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 HHATQ5VTY9 493 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 CREB3L3Q68CJ9 461 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 MICALCLQ6ZW33 695 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 COG3Q96JB2 828 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 ADGRG1Q9Y653 693 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 XRN1Q8IZH2 1706 aaKnown RBP12.02□□□□□ -0.49
CAPN3-203ENST00000349748 SLC4A2P04920 1241 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 USP14P54578 494 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 NLRP6P59044 892 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 GUCY1A3Q02108 690 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 TBX2Q13207 712 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-203ENST00000349748 KCTD16Q68DU8 428 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 G2E3Q7L622 706 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 YTHDF3Q7Z739 585 aaKnown RBP12.02□□□□□ -0.49
CAPN3-203ENST00000349748 CNTROBQ8N137 903 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 TSGA10Q9BZW7 698 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 TMEM165Q9HC07 324 aa12.02□□□□□ -0.49
CAPN3-203ENST00000349748 RBM8AQ9Y5S9 174 aaKnown RBP12.02□□□□□ -0.49
CAPN3-203ENST00000349748 TUBBP07437 444 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 WHAMMP3Q1A5X7 153 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 ABTB2Q8N961 1025 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 ZNF473Q8WTR7 871 aaKnown RBP12.01□□□□□ -0.49
CAPN3-203ENST00000349748 TBC1D5Q92609 795 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
CAPN3-203ENST00000349748 HOMER3Q9NSC5 361 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms