RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TRIM65Q6PJ69 517 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 OLFM4Q6UX06 510 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 VSTM4Q8IW00 320 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 SLC4A4Q9Y6R1 1079 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 FAM205CA6NFA0 338 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 TDO2P48775 406 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 MAP3K12Q12852 859 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 ALX1Q15699 326 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 MED15Q96RN5 788 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 MAN1B1Q9UKM7 699 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 C4AP0C0L4 1744 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 C4BP0C0L5 1744 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 MMP1P03956 469 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 TOP1P11387 765 aaKnown RBP20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 IFNAR1P17181 557 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 ATRNO75882 1429 aa20.79■□□□□ 0.92
PTP4A3-202ENST00000349124 ETF1P62495 437 aaKnown RBP20.78■□□□□ 0.92
PTP4A3-202ENST00000349124 SHISA4Q96DD7 197 aa20.78■□□□□ 0.92
PTP4A3-202ENST00000349124 FBXO2Q9UK22 296 aaPredicted RBP20.78■□□□□ 0.92
PTP4A3-202ENST00000349124 ADKP55263 362 aaKnown RBP20.78■□□□□ 0.92
PTP4A3-202ENST00000349124 RTN1Q16799 776 aa20.78■□□□□ 0.92
PTP4A3-202ENST00000349124 REXO1L1PQ8IX06 675 aa20.78■□□□□ 0.92
PTP4A3-202ENST00000349124 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.78■□□□□ 0.923e-6■□□□□ 9.4
PTP4A3-202ENST00000349124 KIF2AO00139 706 aaPredicted RBP20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 CASP1P29466 404 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 SDR42E1Q8WUS8 393 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 CABP5Q9NP86 173 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 WTAPQ15007 396 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 ADGRA1Q86SQ6 560 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 MPHOSPH8Q99549 860 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 EPC1Q9H2F5 836 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 NFE2L3Q9Y4A8 694 aa20.77■□□□□ 0.92
PTP4A3-202ENST00000349124 MINDY4BA8MYZ0 360 aa20.77■□□□□ 0.91
PTP4A3-202ENST00000349124 SLC5A1P13866 664 aa20.77■□□□□ 0.91
PTP4A3-202ENST00000349124 POSTNQ15063 836 aa20.77■□□□□ 0.91
PTP4A3-202ENST00000349124 TMEM139Q8IV31 216 aa20.77■□□□□ 0.91
PTP4A3-202ENST00000349124 CRACR2BQ8N4Y2 399 aaPredicted RBP20.77■□□□□ 0.91
PTP4A3-202ENST00000349124 SAMSN1Q9NSI8 373 aaKnown RBP20.77■□□□□ 0.91
PTP4A3-202ENST00000349124 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
PTP4A3-202ENST00000349124 PTPREP23469 700 aa20.76■□□□□ 0.91
PTP4A3-202ENST00000349124 ZNF34Q8IZ26 560 aa20.76■□□□□ 0.91
PTP4A3-202ENST00000349124 TOGARAM1Q9Y4F4 1720 aa20.76■□□□□ 0.91
PTP4A3-202ENST00000349124 URI1O94763 535 aaPredicted RBP20.76■□□□□ 0.91
PTP4A3-202ENST00000349124 EARS2Q5JPH6 523 aaKnown RBP20.76■□□□□ 0.91
PTP4A3-202ENST00000349124 NRDCO43847 1150 aa20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 SAFBQ15424 915 aaKnown RBP eCLIP20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 MROH5Q6ZUA9 1318 aa20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 CBFA2T2O43439 604 aa20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 CDK11BP21127 795 aaKnown RBP20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 ARHGAP29Q52LW3 1261 aa20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 CSRNP2Q9H175 543 aa20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 LRP2BPQ9P2M1 347 aa20.75■□□□□ 0.91
PTP4A3-202ENST00000349124 CYP2D7A0A087X1C5 515 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 PRDM1O75626 825 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 KCNJ6P48051 423 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 FANCBQ8NB91 859 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 KRT23Q9C075 422 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 WNT7AO00755 349 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 NOM1Q5C9Z4 860 aaKnown RBP20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 TRIM22Q8IYM9 498 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 ABCF2Q9UG63 623 aa20.74■□□□□ 0.91
PTP4A3-202ENST00000349124 A0A087X0B3 334 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 VWA3AA6NCI4 1184 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 COBLO75128 1261 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 TOGARAM2Q6ZUX3 1019 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 EPSTI1Q96J88 318 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 CNNM2Q9H8M5 875 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 VPS54Q9P1Q0 977 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 CLCN6P51797 869 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 KRT222Q8N1A0 295 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 STAG1Q8WVM7 1258 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 WDR24Q96S15 920 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 CARD6Q9BX69 1037 aa20.73■□□□□ 0.91
PTP4A3-202ENST00000349124 STK36Q9NRP7 1315 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 MYH7P12883 1935 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 H2AFXP16104 143 aaPredicted RBP20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 SARSP49591 514 aaKnown RBP20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 ZNF771Q7L3S4 317 aaPredicted RBP20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 DESI2Q9BSY9 194 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 PPP2R2CQ9Y2T4 447 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 DDX60Q8IY21 1712 aaKnown RBP20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 AFMP43652 599 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 STX17P56962 302 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 EVX2Q03828 476 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 TC2NQ8N9U0 490 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 SMARCE1Q969G3 411 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 SLIT2O94813 1529 aa20.72■□□□□ 0.91
PTP4A3-202ENST00000349124 CYP7A1P22680 504 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 TBX2Q13207 712 aaPredicted RBP20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 MTF1Q14872 753 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 KLHL10Q6JEL2 608 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 RGS22Q8NE09 1264 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 DHX58Q96C10 678 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 BAG1Q99933 345 aaPredicted RBP20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 FOXP1Q9H334 677 aaPredicted RBP20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 ACTN4O43707 911 aaKnown RBP20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 ZNF18P17022 549 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms