RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ATL3Q6DD88 541 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 ANKLE2Q86XL3 938 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 FAM71BQ8TC56 605 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTBP1-201ENST00000349038 GOLGA6CA6NDK9 693 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 GOLGA6DP0CG33 693 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 PDIA6Q15084 440 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 MICU3Q86XE3 530 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 GOLGA6AQ9NYA3 693 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
PTBP1-201ENST00000349038 RGPD2P0DJD1 1756 aa17.22■□□□□ 0.35
PTBP1-201ENST00000349038 SKAP2O75563 359 aaPredicted RBP17.21■□□□□ 0.35
PTBP1-201ENST00000349038 KIAA0754O94854 1291 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 FDPSP14324 419 aaKnown RBP17.21■□□□□ 0.35
PTBP1-201ENST00000349038 CASP14P31944 242 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 E2F5Q15329 346 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
PTBP1-201ENST00000349038 PSD3Q9NYI0 1048 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.21■□□□□ 0.35
PTBP1-201ENST00000349038 SHTN1A0MZ66 631 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 AKR1B15C9JRZ8 316 aaPredicted RBP17.21■□□□□ 0.35
PTBP1-201ENST00000349038 RPSAP08865 295 aaKnown RBP17.21■□□□□ 0.35
PTBP1-201ENST00000349038 TIMM10P62072 90 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 STIM1Q13586 685 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 FOXP4Q8IVH2 680 aaPredicted RBP17.21■□□□□ 0.35
PTBP1-201ENST00000349038 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.35
PTBP1-201ENST00000349038 NDUFAB1O14561 156 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 FAM76AQ8TAV0 307 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 PHRF1Q9P1Y6 1649 aaKnown RBP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 TUBB4AP04350 444 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 CHRM1P11229 460 aaPredicted RBP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 RPAINQ86UA6 219 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 TMEM139Q8IV31 216 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 VPS16Q9H269 839 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 COPRSQ9NQ92 184 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 ABCC6O95255 1503 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 POLR2DO15514 142 aaKnown RBP17.2■□□□□ 0.34
PTBP1-201ENST00000349038 STX10O60499 249 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 RTEL1Q9NZ71 1219 aa17.2■□□□□ 0.34
PTBP1-201ENST00000349038 GOLGA6L9A6NEM1 432 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 PDCLQ13371 301 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 TNNI3KQ59H18 835 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 OTUD6BQ8N6M0 293 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 FPGT-TNNI3KV9GXZ4 949 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
PTBP1-201ENST00000349038 NEURL1BA8MQ27 555 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 E7EWF7 191 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 ZPR1O75312 459 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
PTBP1-201ENST00000349038 RFX5P48382 616 aaPredicted RBP17.18■□□□□ 0.34
PTBP1-201ENST00000349038 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 RUFY1Q96T51 708 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 JADE2Q9NQC1 790 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 BACH1O14867 736 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 HMGB1P09429 215 aaKnown RBP17.18■□□□□ 0.34
PTBP1-201ENST00000349038 SLC7A5Q01650 507 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 GRIN1Q05586 938 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 SND1Q7KZF4 910 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTBP1-201ENST00000349038 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
PTBP1-201ENST00000349038 SH2D3CQ8N5H7 860 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 N4BP2L2Q92802 583 aaPredicted RBP17.18■□□□□ 0.34
PTBP1-201ENST00000349038 NAPGQ99747 312 aaPredicted RBP17.18■□□□□ 0.34
PTBP1-201ENST00000349038 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 GCKRQ14397 625 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 SHC4Q6S5L8 630 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 HAUS7Q99871 368 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 ADGRG1Q9Y653 693 aa17.18■□□□□ 0.34
PTBP1-201ENST00000349038 EIF4E1BA6NMX2 242 aaKnown RBP17.17■□□□□ 0.34
PTBP1-201ENST00000349038 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
PTBP1-201ENST00000349038 EXOSC10Q01780 885 aaKnown RBP17.17■□□□□ 0.34
PTBP1-201ENST00000349038 NFXL1Q6ZNB6 911 aa17.17■□□□□ 0.34
PTBP1-201ENST00000349038 ALG1Q9BT22 464 aa17.17■□□□□ 0.34
PTBP1-201ENST00000349038 TEX13AQ9BXU3 409 aaPredicted RBP17.17■□□□□ 0.34
PTBP1-201ENST00000349038 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
PTBP1-201ENST00000349038 ZNF185O15231 689 aa17.17■□□□□ 0.34
PTBP1-201ENST00000349038 BMP6P22004 513 aa17.17■□□□□ 0.34
PTBP1-201ENST00000349038 RALYLQ86SE5 291 aaKnown RBP17.17■□□□□ 0.34
PTBP1-201ENST00000349038 METTL16Q86W50 562 aaKnown RBP17.17■□□□□ 0.34
PTBP1-201ENST00000349038 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
PTBP1-201ENST00000349038 GBP3Q9H0R5 595 aa17.17■□□□□ 0.34
PTBP1-201ENST00000349038 SH3TC1Q8TE82 1336 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 KCNA6P17658 529 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 PEX19P40855 299 aa17.16■□□□□ 0.34
PTBP1-201ENST00000349038 TRDNQ13061 729 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms