RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
CDK5RAP1-202ENST00000346416 SBK1Q52WX2 424 aa16.41■□□□□ 0.22
CDK5RAP1-202ENST00000346416 IQCA1Q86XH1 822 aa16.41■□□□□ 0.22
CDK5RAP1-202ENST00000346416 TNMDQ9H2S6 317 aa16.41■□□□□ 0.22
CDK5RAP1-202ENST00000346416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ECM29Q5VYK3 1845 aa16.41■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CYP2D6P10635 497 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ME1P48163 572 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 LAMB1P07942 1786 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 C6orf229H3BNL8 230 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 PPEF1O14829 653 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 ORC4O43929 436 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 SLC3A2P08195 630 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 TRIM29Q14134 588 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CCDC82Q8N4S0 544 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 LINC00301Q8NCQ3 95 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 SH3RF3Q8TEJ3 882 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 PDLIM2Q96JY6 352 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CLSTN2Q9H4D0 955 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 CLIC4Q9Y696 253 aa16.4■□□□□ 0.22
CDK5RAP1-202ENST00000346416 BAG3O95817 575 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CCDC192P0DO97 292 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 RXRBP28702 533 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 USP5P45974 858 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 TRIM22Q8IYM9 498 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CMTR1Q8N1G2 835 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 WASF1Q92558 559 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MKRN1Q9UHC7 482 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 LDHCP07864 332 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 USP17L8P0C7I0 530 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 SRGNP10124 158 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CKAP2LQ8IYA6 745 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CRACR2BQ8N4Y2 399 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 FLAD1Q8NFF5 587 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 PCDHA7Q9UN72 937 aa16.39■□□□□ 0.21
CDK5RAP1-202ENST00000346416 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 YEATS4O95619 227 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 PPP4CP60510 307 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 PDE4BQ07343 736 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 STK38Q15208 465 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 SLC4A8Q2Y0W8 1093 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 GOLPH3LQ9H4A5 285 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 ATP6V0A2Q9Y487 856 aa16.38■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MMP10P09238 476 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 GNL2Q13823 731 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 KCNG4Q8TDN1 519 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MROH7-TTC4A0A0A0MT08 1334 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 LTBP1Q14766 1721 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 NRXN2Q9P2S2 1712 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.216e-7■□□□□ 11.2
CDK5RAP1-202ENST00000346416 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 C12orf60Q5U649 245 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 ANO1Q5XXA6 986 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CCDC73Q6ZRK6 1079 aa16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP1-202ENST00000346416 SPTLC2O15270 562 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 NMT2O60551 498 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 DEXIO95424 95 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 NPR1P16066 1061 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 ADALQ6DHV7 355 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 TYRO3Q06418 890 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 TROAPQ12815 778 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 FSIP1Q8NA03 581 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 RRAGDQ9NQL2 400 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP1-202ENST00000346416 DLEC1Q9Y238 1755 aa16.35■□□□□ 0.21
CDK5RAP1-202ENST00000346416 TSPY2A6NKD2 308 aa16.35■□□□□ 0.21
CDK5RAP1-202ENST00000346416 PDE6BP35913 854 aa16.35■□□□□ 0.21
CDK5RAP1-202ENST00000346416 BTDP43251 543 aa16.35■□□□□ 0.21
CDK5RAP1-202ENST00000346416 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
CDK5RAP1-202ENST00000346416 TBC1D22AQ8WUA7 517 aa16.35■□□□□ 0.21
CDK5RAP1-202ENST00000346416 A0A1W2PQ27 194 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 A0A1W2PQ64 194 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 A0A1W2PQD8 194 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 RIMBP2O15034 1052 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 MMP1P03956 469 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CALM1P0DP23 149 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CALM2P0DP24 149 aa16.34■□□□□ 0.21
CDK5RAP1-202ENST00000346416 CALM3P0DP25 149 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms