RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 BAIAP2L1Q9UHR4 511 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 CTNNA1P35221 906 aaKnown RBP21.47■■□□□ 1.03
HDAC4-201ENST00000345617 VEZTQ9HBM0 779 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 KRT15P19012 456 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 ZC3H6P61129 1189 aaKnown RBP21.47■■□□□ 1.03
HDAC4-201ENST00000345617 TXNDC9O14530 226 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 DMTNQ08495 405 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 ZC4H2Q9NQZ6 224 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 IGHDP01880 384 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 KCNH3Q9ULD8 1083 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 CDAN1Q8IWY9 1227 aa21.47■■□□□ 1.03
HDAC4-201ENST00000345617 GRM8O00222 908 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 CUTAO60888 179 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 SEPT2Q15019 361 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 CREB3L3Q68CJ9 461 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 PTPDC1A2A3K4 754 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 HAUS1Q96CS2 278 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 ESRRGP62508 458 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 RPS6KA1Q15418 735 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 HAUS7Q99871 368 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.46■■□□□ 1.03
HDAC4-201ENST00000345617 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 PEX26Q7Z412 305 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 SSH2Q76I76 1423 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 VAT1LQ9HCJ6 419 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 RILPQ96NA2 401 aa21.46■■□□□ 1.03
HDAC4-201ENST00000345617 KIF11P52732 1056 aa21.45■■□□□ 1.03
HDAC4-201ENST00000345617 TRIM68Q6AZZ1 485 aa21.45■■□□□ 1.03
HDAC4-201ENST00000345617 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 ANKLE2Q86XL3 938 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 LARP6Q9BRS8 491 aaKnown RBP21.45■■□□□ 1.02
HDAC4-201ENST00000345617 ORC6Q9Y5N6 252 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 CUL4BQ13620 913 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 RAPGEF6Q8TEU7 1601 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 TRAF5O00463 557 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 CENPKQ9BS16 269 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 KDM2BQ8NHM5 1336 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
HDAC4-201ENST00000345617 SMIM24O75264 130 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 FANCCQ00597 558 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 TPX2Q9ULW0 747 aaKnown RBP21.44■■□□□ 1.02
HDAC4-201ENST00000345617 DEXIO95424 95 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
HDAC4-201ENST00000345617 SLC4A4Q9Y6R1 1079 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 PIK3C2GO75747 1445 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 ZNF804AQ7Z570 1209 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 MAN1A1P33908 653 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 CCDC68Q9H2F9 335 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 CCDC169A6NNP5 214 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 KRT5P13647 590 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 CCDC105Q8IYK2 499 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 LZTS2Q9BRK4 669 aa21.44■■□□□ 1.02
HDAC4-201ENST00000345617 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
HDAC4-201ENST00000345617 TBC1D8O95759 1140 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
HDAC4-201ENST00000345617 SUN1O94901 812 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 XAB2Q9HCS7 855 aaKnown RBP21.43■■□□□ 1.02
HDAC4-201ENST00000345617 MYO1AQ9UBC5 1043 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 EIF3CLB5ME19 914 aaKnown RBP21.43■■□□□ 1.02
HDAC4-201ENST00000345617 INPP1P49441 399 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 EIF3CQ99613 913 aaKnown RBP21.43■■□□□ 1.02
HDAC4-201ENST00000345617 PARD3Q8TEW0 1356 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 TNFAIP3P21580 790 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 HELLSQ9NRZ9 838 aa21.43■■□□□ 1.02
HDAC4-201ENST00000345617 SPZ1Q9BXG8 430 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 PI4KAP2A4QPH2 592 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 RASA3Q14644 834 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 AFAP1Q8N556 730 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 PI4KAP1Q8N8J0 262 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 RNF8O76064 485 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 NLRP12P59046 1061 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 ATP2B3Q16720 1220 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 TXLNGQ9NUQ3 528 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 TUBB6Q9BUF5 446 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 ANKRD20A4Q4UJ75 823 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 ANKRD20A8PQ5CZ79 823 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 ANKRD20A2Q5SQ80 823 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 ANKRD20A1Q5TYW2 823 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 SFMBT2Q5VUG0 894 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 CSGALNACT2Q8N6G5 542 aa21.42■■□□□ 1.02
HDAC4-201ENST00000345617 CNOT10Q9H9A5 744 aaKnown RBP21.42■■□□□ 1.02
HDAC4-201ENST00000345617 ST5P78524 1137 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 ANO1Q5XXA6 986 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 BBOF1Q8ND07 529 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 RABGGTAQ92696 567 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 DCTPP1Q9H773 170 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 FNBP1Q96RU3 617 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 RNF113AO15541 343 aaKnown RBP21.41■■□□□ 1.02
HDAC4-201ENST00000345617 KRT12Q99456 494 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 EFCC1Q9HA90 598 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 VWA3AA6NCI4 1184 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 ZKSCAN8Q15776 578 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-201ENST00000345617 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-201ENST00000345617 STK38LQ9Y2H1 464 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 SLC12A2P55011 1212 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 TMEM87BQ96K49 555 aa21.41■■□□□ 1.02
HDAC4-201ENST00000345617 ANKRD13DQ6ZTN6 518 aa21.4■■□□□ 1.02
HDAC4-201ENST00000345617 POSTNQ15063 836 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms