RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 MMP10P09238 476 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 MSNP26038 577 aaKnown RBP21.64■■□□□ 1.05
HOXA9-201ENST00000343483 UVSSAQ2YD98 709 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 ATL3Q6DD88 541 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 SGIP1Q9BQI5 828 aa21.64■■□□□ 1.05
HOXA9-201ENST00000343483 ARPP21Q9UBL0 812 aaPredicted RBP21.64■■□□□ 1.05
HOXA9-201ENST00000343483 DUOX1Q9NRD9 1551 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 POLR3DP05423 398 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-201ENST00000343483 CYP2D6P10635 497 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 PCP11498 1178 aaKnown RBP21.63■■□□□ 1.05
HOXA9-201ENST00000343483 IL1R1P14778 569 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 RTN1Q16799 776 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 TMC4Q7Z404 712 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 ZNF654Q8IZM8 581 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 NUP133Q8WUM0 1156 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 ZSCAN10Q96SZ4 725 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-201ENST00000343483 SLC26A6Q9BXS9 759 aa21.63■■□□□ 1.05
HOXA9-201ENST00000343483 BAZ2AQ9UIF9 1905 aaKnown RBP21.63■■□□□ 1.05
HOXA9-201ENST00000343483 SLC4A8Q2Y0W8 1093 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 MCM9Q9NXL9 1143 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 PARP3Q9Y6F1 533 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 SLC3A2P08195 630 aaKnown RBP21.62■■□□□ 1.05
HOXA9-201ENST00000343483 SRGNP10124 158 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 USP5P45974 858 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 SSRP1Q08945 709 aaKnown RBP21.62■■□□□ 1.05
HOXA9-201ENST00000343483 SEC23AQ15436 765 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 IQCA1Q86XH1 822 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 SP8Q8IXZ3 490 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 ENAHQ8N8S7 591 aaPredicted RBP21.62■■□□□ 1.05
HOXA9-201ENST00000343483 SH3RF3Q8TEJ3 882 aaPredicted RBP21.62■■□□□ 1.05
HOXA9-201ENST00000343483 NOL10Q9BSC4 688 aaKnown RBP21.62■■□□□ 1.05
HOXA9-201ENST00000343483 DACT1Q9NYF0 836 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 RCOR1Q9UKL0 485 aa21.62■■□□□ 1.05
HOXA9-201ENST00000343483 NID2Q14112 1375 aa21.61■■□□□ 1.05
HOXA9-201ENST00000343483 IGSF3O75054 1194 aa21.61■■□□□ 1.05
HOXA9-201ENST00000343483 BAG3O95817 575 aa21.61■■□□□ 1.05
HOXA9-201ENST00000343483 FGRP09769 529 aa21.61■■□□□ 1.05
HOXA9-201ENST00000343483 FUCA2Q9BTY2 467 aa21.61■■□□□ 1.05
HOXA9-201ENST00000343483 ATP6V0A2Q9Y487 856 aa21.61■■□□□ 1.05
HOXA9-201ENST00000343483 CCDC88AQ3V6T2 1871 aa21.61■■□□□ 1.05
HOXA9-201ENST00000343483 KIF23Q02241 960 aaPredicted RBP21.6■■□□□ 1.05
HOXA9-201ENST00000343483 BRAPQ7Z569 592 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 SLC16A10Q8TF71 515 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 NUP62CLQ9H1M0 184 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 CCDC196A0A1B0GTZ2 297 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 KIF28PB7ZC32 967 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 UBE2Q2LH0YL09 131 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 FMNL1O95466 1100 aaPredicted RBP21.6■■□□□ 1.05
HOXA9-201ENST00000343483 USP17L8P0C7I0 530 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 NPR1P16066 1061 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 IFNAR1P17181 557 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 TRIM29Q14134 588 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 CAMK4Q16566 473 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 SBK1Q52WX2 424 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 IFIT1BQ5T764 474 aaKnown RBP21.6■■□□□ 1.05
HOXA9-201ENST00000343483 KRT40Q6A162 431 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 CCDC82Q8N4S0 544 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 FANCBQ8NB91 859 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.6■■□□□ 1.05
HOXA9-201ENST00000343483 CCDC39Q9UFE4 941 aa21.6■■□□□ 1.05
HOXA9-201ENST00000343483 NOL7Q9UMY1 257 aaKnown RBP21.6■■□□□ 1.05
HOXA9-201ENST00000343483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
HOXA9-201ENST00000343483 MROH7-TTC4A0A0A0MT08 1334 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 STK36Q9NRP7 1315 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 LDHCP07864 332 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 MFSD14BQ5SR56 506 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 CMTR1Q8N1G2 835 aaKnown RBP21.59■■□□□ 1.05
HOXA9-201ENST00000343483 RIMBP2O15034 1052 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 ORC4O43929 436 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 PDE6BP35913 854 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 RCAN1P53805 252 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 OLFM4Q6UX06 510 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 TRIM22Q8IYM9 498 aa21.59■■□□□ 1.05
HOXA9-201ENST00000343483 NR1I2O75469 434 aa21.58■■□□□ 1.05
HOXA9-201ENST00000343483 ME1P48163 572 aa21.58■■□□□ 1.05
HOXA9-201ENST00000343483 PDE4BQ07343 736 aa21.58■■□□□ 1.05
HOXA9-201ENST00000343483 GNL2Q13823 731 aaKnown RBP21.58■■□□□ 1.05
HOXA9-201ENST00000343483 FAM47AQ5JRC9 791 aa21.58■■□□□ 1.05
HOXA9-201ENST00000343483 MYSM1Q5VVJ2 828 aa21.58■■□□□ 1.05
HOXA9-201ENST00000343483 RGS22Q8NE09 1264 aa21.58■■□□□ 1.05
HOXA9-201ENST00000343483 ANKRD31Q8N7Z5 1873 aa21.58■■□□□ 1.04
HOXA9-201ENST00000343483 WASF1Q92558 559 aa21.57■■□□□ 1.04
HOXA9-201ENST00000343483 DDX19AQ9NUU7 478 aaKnown RBP21.57■■□□□ 1.04
HOXA9-201ENST00000343483 RTEL1Q9NZ71 1219 aa21.57■■□□□ 1.04
HOXA9-201ENST00000343483 CATIPQ7Z7H3 387 aa21.57■■□□□ 1.04
HOXA9-201ENST00000343483 TGFBRAP1Q8WUH2 860 aa21.57■■□□□ 1.04
HOXA9-201ENST00000343483 RTFDC1Q9BY42 306 aaPredicted RBP21.57■■□□□ 1.04
HOXA9-201ENST00000343483 TNMDQ9H2S6 317 aa21.57■■□□□ 1.04
HOXA9-201ENST00000343483 MKRN1Q9UHC7 482 aaKnown RBP21.57■■□□□ 1.04
HOXA9-201ENST00000343483 CLIC4Q9Y696 253 aa21.57■■□□□ 1.04
HOXA9-201ENST00000343483 MYH15Q9Y2K3 1946 aa21.57■■□□□ 1.04
HOXA9-201ENST00000343483 NMT2O60551 498 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 CCDC192P0DO97 292 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 ALDH1B1P30837 517 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 GUCY1A2P33402 732 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 BTDP43251 543 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 PPP4CP60510 307 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 MAP3K11Q16584 847 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 USP25Q9UHP3 1055 aa21.56■■□□□ 1.04
HOXA9-201ENST00000343483 LRRC37AA6NMS7 1700 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms