RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DNM3Q9UQ16 869 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 ZBTB7BO15156 539 aaPredicted RBP16.79■□□□□ 0.28
UBE3B-202ENST00000342494 RRP9O43818 475 aaKnown RBP16.79■□□□□ 0.28
UBE3B-202ENST00000342494 ZAP70P43403 619 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 OPA1O60313 960 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 TFAP4Q01664 338 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 MYL5Q02045 173 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 FAM204AQ9H8W3 233 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 SH3BP5O60239 455 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 LIN9Q5TKA1 542 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 ZMYND15Q9H091 742 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 E7EVH7 732 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 ZNF710Q8N1W2 664 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 CHL1O00533 1208 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 PSMC4P43686 418 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 ANO1Q5XXA6 986 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 CHURC1Q8WUH1 139 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 GLG1Q92896 1179 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 USP26Q9BXU7 913 aa16.78■□□□□ 0.28
UBE3B-202ENST00000342494 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 ZNF569Q5MCW4 686 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 SELENOSQ9BQE4 189 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 TNNC1P63316 161 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 MCM6Q14566 821 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 MAP7D1Q3KQU3 841 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 HACE1Q8IYU2 909 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 NCOA5Q9HCD5 579 aaKnown RBP16.77■□□□□ 0.28
UBE3B-202ENST00000342494 ABCC2Q92887 1545 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 TUBB4AP04350 444 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 FAM160A1Q05DH4 1040 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 SMC6Q96SB8 1091 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 CSRNP2Q9H175 543 aa16.77■□□□□ 0.28
UBE3B-202ENST00000342494 SMIM23A6NLE4 172 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 CCDC6Q16204 474 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 HERC4Q5GLZ8 1057 aaPredicted RBP16.77■□□□□ 0.27
UBE3B-202ENST00000342494 FAM47CQ5HY64 1035 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 FAM227BQ96M60 508 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 MYL10Q9BUA6 226 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 TSGA10Q9BZW7 698 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.27
UBE3B-202ENST00000342494 NLRX1Q86UT6 975 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 MYCT1Q8N699 235 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 PRIMPOLQ96LW4 560 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.27
UBE3B-202ENST00000342494 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 DCAF15Q66K64 600 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 TICAM2Q86XR7 235 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
UBE3B-202ENST00000342494 KRT19P08727 400 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 IFT81Q8WYA0 676 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 ARID4AP29374 1257 aaPredicted RBP16.76■□□□□ 0.27
UBE3B-202ENST00000342494 CALCRLQ16602 461 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 UIMC1Q96RL1 719 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 LLPHQ9BRT6 129 aaKnown RBP16.76■□□□□ 0.27
UBE3B-202ENST00000342494 CTSWP56202 376 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 ATRIPQ8WXE1 791 aa16.76■□□□□ 0.27
UBE3B-202ENST00000342494 ERCC5P28715 1186 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-202ENST00000342494 CSGALNACT2Q8N6G5 542 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 ARPP21Q9UBL0 812 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-202ENST00000342494 MAPK8IP1Q9UQF2 711 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 TLDC2A0PJX2 215 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 CCDC122Q5T0U0 273 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 DCPSQ96C86 337 aaKnown RBP16.75■□□□□ 0.27
UBE3B-202ENST00000342494 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBE3B-202ENST00000342494 SULF1Q8IWU6 871 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 NDUFB9Q9Y6M9 179 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 GNPTABQ3T906 1256 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 EXOC3O60645 756 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 PPP1R21Q6ZMI0 780 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 CNKSR1Q969H4 720 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 VPS16Q9H269 839 aa16.75■□□□□ 0.27
UBE3B-202ENST00000342494 AKR1B15C9JRZ8 316 aaPredicted RBP16.74■□□□□ 0.27
UBE3B-202ENST00000342494 VAV2P52735 878 aa16.74■□□□□ 0.27
UBE3B-202ENST00000342494 BIRC2Q13490 618 aa16.74■□□□□ 0.27
UBE3B-202ENST00000342494 CD19P15391 556 aa16.74■□□□□ 0.27
UBE3B-202ENST00000342494 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
UBE3B-202ENST00000342494 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBE3B-202ENST00000342494 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
UBE3B-202ENST00000342494 CFAP157Q5JU67 520 aa16.74■□□□□ 0.27
UBE3B-202ENST00000342494 AOX1Q06278 1338 aa16.74■□□□□ 0.27
UBE3B-202ENST00000342494 REXO1Q8N1G1 1221 aaKnown RBP16.74■□□□□ 0.27
UBE3B-202ENST00000342494 TCP10L2B9ZVM9 353 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 HSPA4P34932 840 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 QTRT2Q9H974 415 aaKnown RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 POLR2DO15514 142 aaKnown RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 STK10O94804 968 aaKnown RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 DYMQ7RTS9 669 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 OTUD7AQ8TE49 926 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 ZBTB24O43167 697 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 ASIC2Q16515 512 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 PHKBQ93100 1093 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 GCNT3O95395 438 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 CNGA1P29973 690 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms