RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 PLCD1P51178 756 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 HHIPL2Q6UWX4 724 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 USP17L1Q7RTZ2 530 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 FAM217BQ9NTX9 383 aaPredicted RBP20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 SAP30BPQ9UHR5 308 aaKnown RBP20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 NID2Q14112 1375 aa20.14■□□□□ 0.81
FRMD4A-202ENST00000342409 RXRAP19793 462 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 MCTP1Q6DN14 999 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 CDC37L1Q7L3B6 337 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 DYNLL2Q96FJ2 89 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 PIM2Q9P1W9 311 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 PPFIA3O75145 1194 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 CDC27P30260 824 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 APOBEC3HQ6NTF7 200 aaKnown RBP20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 MYL10Q9BUA6 226 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 ZNF277Q9NRM2 450 aaPredicted RBP20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 PCDHAC2Q9Y5I4 1007 aa20.13■□□□□ 0.81
FRMD4A-202ENST00000342409 TNKSO95271 1327 aa20.12■□□□□ 0.81
FRMD4A-202ENST00000342409 RANBP6O60518 1105 aaKnown RBP20.12■□□□□ 0.81
FRMD4A-202ENST00000342409 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
FRMD4A-202ENST00000342409 PDCP20941 246 aa20.12■□□□□ 0.81
FRMD4A-202ENST00000342409 WTAPQ15007 396 aa20.12■□□□□ 0.81
FRMD4A-202ENST00000342409 KIAA0825Q8IV33 1275 aa20.12■□□□□ 0.81
FRMD4A-202ENST00000342409 ENAHQ8N8S7 591 aaPredicted RBP20.12■□□□□ 0.81
FRMD4A-202ENST00000342409 VPS37CA5D8V6 355 aaPredicted RBP20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 ADD1P35611 737 aaKnown RBP20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 CRKP46108 304 aa20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 HMGN5P82970 282 aaKnown RBP20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 ZSCAN10Q96SZ4 725 aaPredicted RBP20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 MRIQ9BWK5 157 aa20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 DDX4Q9NQI0 724 aaKnown RBP20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
FRMD4A-202ENST00000342409 ZBTB43O43298 467 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 METAP2P50579 478 aaKnown RBP eCLIP20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 NTRK3Q16288 839 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 FAM47AQ5JRC9 791 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 CDC42EP5Q6NZY7 148 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 MICU3Q86XE3 530 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 SLC44A5Q8NCS7 719 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 TEKT1Q969V4 418 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 SLC3A2P08195 630 aaKnown RBP20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 SART3Q15020 963 aaKnown RBP20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 FOXD4L6Q3SYB3 417 aaPredicted RBP20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 FOXD4L3Q6VB84 417 aaPredicted RBP20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 NFXL1Q6ZNB6 911 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 ZDHHC15Q96MV8 337 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 UBAC1Q9BSL1 405 aa20.1■□□□□ 0.81
FRMD4A-202ENST00000342409 CCDC69A6NI79 296 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 TRAK2O60296 914 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 NMT2O60551 498 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 HDLBPQ00341 1268 aaKnown RBP20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 PDE4BQ07343 736 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 DALRD3Q5D0E6 543 aaKnown RBP20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 CCDC144CPQ8IYA2 1237 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 USP40Q9NVE5 1235 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 CD2APQ9Y5K6 639 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 SLC12A7Q9Y666 1083 aa20.09■□□□□ 0.81
FRMD4A-202ENST00000342409 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
FRMD4A-202ENST00000342409 POLR3DP05423 398 aaPredicted RBP20.08■□□□□ 0.81
FRMD4A-202ENST00000342409 ZNF654Q8IZM8 581 aa20.08■□□□□ 0.81
FRMD4A-202ENST00000342409 CHMP4CQ96CF2 233 aa20.08■□□□□ 0.81
FRMD4A-202ENST00000342409 GREB1LQ9C091 1923 aaPredicted RBP20.08■□□□□ 0.81
FRMD4A-202ENST00000342409 PDIA4P13667 645 aaKnown RBP20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 SOGA3Q5TF21 947 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 RCSD1Q6JBY9 416 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 FERMT3Q86UX7 667 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 TMTC2Q8N394 836 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 LARGE2Q8N3Y3 721 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 FAM184AQ8NB25 1140 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 BAZ2BQ9UIF8 2168 aaKnown RBP20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 ERICH2A1L162 156 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 DHX16O60231 1041 aaKnown RBP20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 RASA1P20936 1047 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 C16orf86Q6ZW13 317 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 VPS33BQ9H267 617 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 IL17RBQ9NRM6 502 aa20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 PPP1R1BQ9UD71 204 aaPredicted RBP20.07■□□□□ 0.8
FRMD4A-202ENST00000342409 NFKBIEO00221 500 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 CDK8P49336 464 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 RCAN1P53805 252 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 NFIAQ12857 509 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 RESTQ13127 1097 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 PICALMQ13492 652 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 IQCA1Q86XH1 822 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 GMLQ99445 158 aa20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 ORC3Q9UBD5 711 aaPredicted RBP20.06■□□□□ 0.8
FRMD4A-202ENST00000342409 GOLGA6L22H0YM25 854 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 PSMD14O00487 310 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 RAD17O75943 681 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 VIL1P09327 827 aaKnown RBP20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 FOSBP53539 338 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 TFAP4Q01664 338 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 AMOTL1Q8IY63 956 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 SERPINA10Q9UK55 444 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 CPLX1O14810 134 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 PRPF40AO75400 957 aaKnown RBP20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 GABPAQ06546 454 aa20.05■□□□□ 0.8
FRMD4A-202ENST00000342409 IFIT1BQ5T764 474 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms