RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 PLEKHA4Q9H4M7 779 aa14.33□□□□□ -0.12
LMX1A-202ENST00000342310 TNKSO95271 1327 aa14.33□□□□□ -0.12
LMX1A-202ENST00000342310 MAP3K15Q6ZN16 1313 aa14.33□□□□□ -0.12
LMX1A-202ENST00000342310 TRIM75PA6NK02 468 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 F8W031 263 aaPredicted RBP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 NAP1L1P55209 391 aaKnown RBP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 EVCP57679 992 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 CAVIN4Q5BKX8 364 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 CTCFLQ8NI51 663 aaPredicted RBP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 TFRCP02786 760 aaKnown RBP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 LRP10Q7Z4F1 713 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 KRT222Q8N1A0 295 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 MKNK2Q9HBH9 465 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 PLEKHA8P1O95397 391 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 UQCRFS1P1P0C7P4 283 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 GOLGA8HP0CJ92 632 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 EIF6P56537 245 aaKnown RBP14.32□□□□□ -0.12
LMX1A-202ENST00000342310 KRBA2Q6ZNG9 492 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 ZHX3Q9H4I2 956 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 MCM9Q9NXL9 1143 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 ZMYM6O95789 1325 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 UBN2Q6ZU65 1347 aa14.32□□□□□ -0.12
LMX1A-202ENST00000342310 FILIP1LQ4L180 1135 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
LMX1A-202ENST00000342310 SPATA31A3Q5VYP0 1347 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 PATL2C9JE40 543 aaKnown RBP14.31□□□□□ -0.12
LMX1A-202ENST00000342310 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
LMX1A-202ENST00000342310 TRMT1LQ7Z2T5 733 aaKnown RBP14.31□□□□□ -0.12
LMX1A-202ENST00000342310 FANCBQ8NB91 859 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 ESR2Q92731 530 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 CTNND2Q9UQB3 1225 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 MATR3P43243 847 aaKnown RBP eCLIP14.31□□□□□ -0.12
LMX1A-202ENST00000342310 CHRNDQ07001 517 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 CCDC152Q4G0S7 254 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 ZNF569Q5MCW4 686 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 ZNF397Q8NF99 534 aaPredicted RBP14.31□□□□□ -0.12
LMX1A-202ENST00000342310 CAPZA3Q96KX2 299 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 PSMB7Q99436 277 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
LMX1A-202ENST00000342310 TAB2Q9NYJ8 693 aa14.31□□□□□ -0.12
LMX1A-202ENST00000342310 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
LMX1A-202ENST00000342310 DZIP1Q86YF9 867 aaKnown RBP14.3□□□□□ -0.12
LMX1A-202ENST00000342310 SOWAHDA6NJG2 315 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 TEX33O43247 280 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 KCNQ2O43526 872 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 FMR1Q06787 632 aaKnown RBP eCLIP14.3□□□□□ -0.12
LMX1A-202ENST00000342310 DDB1Q16531 1140 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 AXDND1Q5T1B0 1012 aaPredicted RBP14.3□□□□□ -0.12
LMX1A-202ENST00000342310 HEATR3Q7Z4Q2 680 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 FOXP4Q8IVH2 680 aaPredicted RBP14.3□□□□□ -0.12
LMX1A-202ENST00000342310 IGSF22Q8N9C0 903 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 WASF1Q92558 559 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 KRT23Q9C075 422 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 RABEP2Q9H5N1 569 aa14.3□□□□□ -0.12
LMX1A-202ENST00000342310 CCDC196A0A1B0GTZ2 297 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 CYP2D6P10635 497 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 PPARAQ07869 468 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 ANKRD18AQ8IVF6 992 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 CCDC102AQ96A19 550 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 OGFRQ9NZT2 677 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 GUCA1BQ9UMX6 200 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 MRPS25P82663 173 aaKnown RBP14.29□□□□□ -0.12
LMX1A-202ENST00000342310 TOGARAM2Q6ZUX3 1019 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 LY9Q9HBG7 655 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 FOXP2O15409 715 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 ZSCAN12O43309 604 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 ERO1AQ96HE7 468 aa14.29□□□□□ -0.12
LMX1A-202ENST00000342310 GTPBP4Q9BZE4 634 aaKnown RBP14.29□□□□□ -0.12
LMX1A-202ENST00000342310 SOS2Q07890 1332 aaPredicted RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 CIAO1O76071 339 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 EIF5P55010 431 aaKnown RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 ETF1P62495 437 aaKnown RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 WWC2Q6AWC2 1192 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 ANKRD20A12PQ8NF67 263 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 TMEM87BQ96K49 555 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 NOL10Q9BSC4 688 aaKnown RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 TEX13AQ9BXU3 409 aaPredicted RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 A0A1W2PQ27 194 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 A0A1W2PQ64 194 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 A0A1W2PQD8 194 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 IDEP14735 1019 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 SYMPKQ92797 1274 aaKnown RBP14.28□□□□□ -0.12
LMX1A-202ENST00000342310 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
LMX1A-202ENST00000342310 NWD1Q149M9 1564 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms