RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 FBXO33Q7Z6M2 555 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 RPS6KA4O75676 772 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 RPS8P62241 208 aaKnown RBP23.25■■□□□ 1.31
SPG7-202ENST00000341316 DPCR1Q3MIW9 517 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 CCDC144BQ3MJ40 725 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 SHC4Q6S5L8 630 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 AOPEPQ8N6M6 819 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 CLIP2Q9UDT6 1046 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 KCNJ14Q9UNX9 436 aa23.25■■□□□ 1.31
SPG7-202ENST00000341316 GNPATO15228 680 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 SEC23AQ15436 765 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 ZNF654Q8IZM8 581 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 CLIC6Q96NY7 704 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 SETDB2Q96T68 719 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 ERICH2A1L162 156 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 BECN2A8MW95 431 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 BTBD18B2RXH4 712 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 PPP6R2O75170 966 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 NBPF5PQ86XG9 351 aaPredicted RBP23.24■■□□□ 1.31
SPG7-202ENST00000341316 CEP57L1Q8IYX8 460 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 TFCP2L1Q9NZI6 479 aa23.24■■□□□ 1.31
SPG7-202ENST00000341316 EVX2Q03828 476 aa23.23■■□□□ 1.31
SPG7-202ENST00000341316 RC3H1Q5TC82 1133 aaKnown RBP23.23■■□□□ 1.31
SPG7-202ENST00000341316 CRACR2BQ8N4Y2 399 aaPredicted RBP23.23■■□□□ 1.31
SPG7-202ENST00000341316 FANCBQ8NB91 859 aa23.23■■□□□ 1.31
SPG7-202ENST00000341316 NUP133Q8WUM0 1156 aa23.23■■□□□ 1.31
SPG7-202ENST00000341316 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
SPG7-202ENST00000341316 HPSEQ9Y251 543 aa23.23■■□□□ 1.31
SPG7-202ENST00000341316 TNKSO95271 1327 aa23.23■■□□□ 1.31
SPG7-202ENST00000341316 BIN1O00499 593 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 RGL2O15211 777 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 MMP1P03956 469 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 NLRP3Q96P20 1036 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 UBAC1Q9BSL1 405 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 SLC3A2P08195 630 aaKnown RBP23.22■■□□□ 1.31
SPG7-202ENST00000341316 CDC25BP30305 580 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 NOSTRINQ8IVI9 506 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 NYXQ9GZU5 481 aa23.22■■□□□ 1.31
SPG7-202ENST00000341316 TOB1P50616 345 aaPredicted RBP23.21■■□□□ 1.31
SPG7-202ENST00000341316 SLC51AQ86UW1 340 aa23.21■■□□□ 1.31
SPG7-202ENST00000341316 TMTC2Q8N394 836 aa23.21■■□□□ 1.31
SPG7-202ENST00000341316 ESR2Q92731 530 aa23.21■■□□□ 1.31
SPG7-202ENST00000341316 PRDM1O75626 825 aa23.21■■□□□ 1.31
SPG7-202ENST00000341316 SMAP1Q8IYB5 467 aaPredicted RBP23.21■■□□□ 1.31
SPG7-202ENST00000341316 DIS3L2Q8IYB7 885 aaKnown RBP23.21■■□□□ 1.31
SPG7-202ENST00000341316 WASF1Q92558 559 aa23.21■■□□□ 1.31
SPG7-202ENST00000341316 NSUN4Q96CB9 384 aaKnown RBP23.21■■□□□ 1.31
SPG7-202ENST00000341316 MRFAP1L1Q96HT8 127 aa23.21■■□□□ 1.31
SPG7-202ENST00000341316 ZPR1O75312 459 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 MECOMQ03112 1051 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 TRIM22Q8IYM9 498 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 ENAHQ8N8S7 591 aaPredicted RBP23.2■■□□□ 1.3
SPG7-202ENST00000341316 CACTINQ8WUQ7 758 aaKnown RBP23.2■■□□□ 1.3
SPG7-202ENST00000341316 BRIP1Q9BX63 1249 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.2■■□□□ 1.3
SPG7-202ENST00000341316 TM4SF1P30408 202 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 SYKP43405 635 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 CTR9Q6PD62 1173 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 TXNRD3Q86VQ6 643 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 SHISA4Q96DD7 197 aa23.2■■□□□ 1.3
SPG7-202ENST00000341316 NAT10Q9H0A0 1025 aaKnown RBP23.2■■□□□ 1.3
SPG7-202ENST00000341316 CCNL1Q9UK58 526 aaPredicted RBP23.2■■□□□ 1.3
SPG7-202ENST00000341316 BTAF1O14981 1849 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 UBAP1LF5GYI3 381 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 RESP18Q5W5W9 173 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 FNBP4Q8N3X1 1017 aaPredicted RBP23.19■■□□□ 1.3
SPG7-202ENST00000341316 ARHGEF1Q92888 912 aaKnown RBP23.19■■□□□ 1.3
SPG7-202ENST00000341316 DUOX1Q9NRD9 1551 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 FAM237AA0A1B0GTK4 181 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 DEXIO95424 95 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 NR5A1Q13285 461 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 PPP4R3BQ5MIZ7 849 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 JMYQ8N9B5 988 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 C16orf45Q96MC5 204 aaPredicted RBP23.19■■□□□ 1.3
SPG7-202ENST00000341316 ZSCAN10Q96SZ4 725 aaPredicted RBP23.19■■□□□ 1.3
SPG7-202ENST00000341316 PRDM10Q9NQV6 1147 aa23.19■■□□□ 1.3
SPG7-202ENST00000341316 BAZ2AQ9UIF9 1905 aaKnown RBP23.19■■□□□ 1.3
SPG7-202ENST00000341316 COL24A1Q17RW2 1714 aa23.18■■□□□ 1.3
SPG7-202ENST00000341316 HIBADHP31937 336 aaKnown RBP23.18■■□□□ 1.3
SPG7-202ENST00000341316 RCAN1P53805 252 aa23.18■■□□□ 1.3
SPG7-202ENST00000341316 ARID5BQ14865 1188 aa23.18■■□□□ 1.3
SPG7-202ENST00000341316 ISM2Q6H9L7 571 aa23.18■■□□□ 1.3
SPG7-202ENST00000341316 OXER1Q8TDS5 423 aa23.18■■□□□ 1.3
SPG7-202ENST00000341316 JAG2Q9Y219 1238 aa23.18■■□□□ 1.3
SPG7-202ENST00000341316 CCDC196A0A1B0GTZ2 297 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 USP17L12C9JPN9 530 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 USP17L21D6R901 530 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 SEMA3EO15041 775 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 CTIFO43310 598 aaKnown RBP23.17■■□□□ 1.3
SPG7-202ENST00000341316 PRDX5P30044 214 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 NLRP12P59046 1061 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
SPG7-202ENST00000341316 TPTE2Q6XPS3 522 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 TIGD1Q96MW7 591 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 EP400Q96L91 3159 aa23.17■■□□□ 1.3
SPG7-202ENST00000341316 RTCBQ9Y3I0 505 aaKnown RBP23.17■■□□□ 1.3
SPG7-202ENST00000341316 CUTAO60888 179 aa23.16■■□□□ 1.3
SPG7-202ENST00000341316 FGRP09769 529 aa23.16■■□□□ 1.3
SPG7-202ENST00000341316 GRIN1Q05586 938 aa23.16■■□□□ 1.3
SPG7-202ENST00000341316 SAFBQ15424 915 aaKnown RBP eCLIP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms