RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MCF2L2Q86YR7 1114 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 GLG1Q92896 1179 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 CRAMP1Q96RY5 1269 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 AP5M1Q9H0R1 490 aa14.61□□□□□ -0.07
LIN54-201ENST00000340417 TMEM232C9JQI7 657 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 STX6O43752 255 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 CAMK4Q16566 473 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 SPICE1Q8N0Z3 855 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 ATP8A2Q9NTI2 1148 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 CCPG1Q9ULG6 757 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 V9GY48 417 aaPredicted RBP14.6□□□□□ -0.07
LIN54-201ENST00000340417 CPDO75976 1380 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 HOXD10P28358 340 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 JAKMIP3Q5VZ66 844 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 ZNF397Q8NF99 534 aaPredicted RBP14.6□□□□□ -0.07
LIN54-201ENST00000340417 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
LIN54-201ENST00000340417 MMRN2Q9H8L6 949 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 TESPA1A2RU30 521 aaPredicted RBP14.6□□□□□ -0.07
LIN54-201ENST00000340417 DNM2P50570 870 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 CCDC181Q5TID7 509 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 MICALL2Q8IY33 904 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 TRIM6Q9C030 488 aaPredicted RBP14.6□□□□□ -0.07
LIN54-201ENST00000340417 H7C1W4 665 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 DIXDC1Q155Q3 683 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 CD209Q9NNX6 404 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 GPR108Q9NPR9 543 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 PALD1Q9ULE6 856 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 CNPY2Q9Y2B0 182 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 LMNB1P20700 586 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 USP8P40818 1118 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 STYK1Q6J9G0 422 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 WRNIP1Q96S55 665 aa14.6□□□□□ -0.07
LIN54-201ENST00000340417 ZSCAN16Q9H4T2 348 aaPredicted RBP14.6□□□□□ -0.07
LIN54-201ENST00000340417 TNNT3P45378 269 aaPredicted RBP14.59□□□□□ -0.07
LIN54-201ENST00000340417 CACNA2D4Q7Z3S7 1137 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 TDRD3Q9H7E2 651 aaKnown RBP14.59□□□□□ -0.07
LIN54-201ENST00000340417 CNOT7Q9UIV1 285 aaKnown RBP14.59□□□□□ -0.07
LIN54-201ENST00000340417 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
LIN54-201ENST00000340417 IL27Q8NEV9 243 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 ZEB2O60315 1214 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 C9orf131Q5VYM1 1079 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 KANK3Q6NY19 840 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 HAUS7Q99871 368 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 RUFY3Q7L099 469 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 SERPINB13Q9UIV8 391 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 KRT13P13646 458 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 RICTORQ6R327 1708 aa14.59□□□□□ -0.07
LIN54-201ENST00000340417 DYNLL1P63167 89 aaKnown RBP14.58□□□□□ -0.07
LIN54-201ENST00000340417 DEXIO95424 95 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
LIN54-201ENST00000340417 LRRC7Q96NW7 1537 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 SLC27A2O14975 620 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 TRAK2O60296 914 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 ZNF157P51786 506 aaPredicted RBP14.58□□□□□ -0.08
LIN54-201ENST00000340417 DTHD1Q6ZMT9 781 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 BCORL1Q5H9F3 1711 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 MTIF2P46199 727 aaKnown RBP14.58□□□□□ -0.08
LIN54-201ENST00000340417 CACNB3P54284 484 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 TGFB2P61812 414 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 MAP3K11Q16584 847 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
LIN54-201ENST00000340417 GCOM1H8Y6P7 765 aaPredicted RBP14.57□□□□□ -0.08
LIN54-201ENST00000340417 POLR2MP0CAP2 368 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 TOP1P11387 765 aaKnown RBP14.57□□□□□ -0.08
LIN54-201ENST00000340417 FBXO11Q86XK2 927 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 COA7Q96BR5 231 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 IFT74Q96LB3 600 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 UBE3CQ15386 1083 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 TRPC6Q9Y210 931 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 SLIT1O75093 1534 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 CDHR2Q9BYE9 1310 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 CCNT1O60563 726 aaKnown RBP14.57□□□□□ -0.08
LIN54-201ENST00000340417 ASIC1P78348 528 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 MECOMQ03112 1051 aa14.57□□□□□ -0.08
LIN54-201ENST00000340417 ADCY9O60503 1353 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 HARSP12081 509 aaKnown RBP14.56□□□□□ -0.08
LIN54-201ENST00000340417 RRAGBQ5VZM2 374 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 KANSL2Q9H9L4 492 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 USP42Q9H9J4 1324 aaKnown RBP14.56□□□□□ -0.08
LIN54-201ENST00000340417 SORBS3O60504 671 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 VPS36Q86VN1 386 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 FOXP4Q8IVH2 680 aaPredicted RBP14.56□□□□□ -0.08
LIN54-201ENST00000340417 ZSCAN10Q96SZ4 725 aaPredicted RBP14.56□□□□□ -0.08
LIN54-201ENST00000340417 MYL10Q9BUA6 226 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 DSCC1Q9BVC3 393 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 CAMTA2O94983 1202 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 KIF4AO95239 1232 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
LIN54-201ENST00000340417 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 ATP6V0A2Q9Y487 856 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 ZHX2Q9Y6X8 837 aa14.56□□□□□ -0.08
LIN54-201ENST00000340417 ENOX2Q16206 610 aaKnown RBP14.55□□□□□ -0.08
LIN54-201ENST00000340417 OTUD5Q96G74 571 aa14.55□□□□□ -0.08
LIN54-201ENST00000340417 TMX3Q96JJ7 454 aa14.55□□□□□ -0.08
LIN54-201ENST00000340417 ZHX1Q9UKY1 873 aaPredicted RBP14.55□□□□□ -0.08
LIN54-201ENST00000340417 PRKCSHP14314 528 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms