RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 JCADQ9P266 1359 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 PTPDC1A2A3K4 754 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 KIF28PB7ZC32 967 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 ZMYND10O75800 440 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 USPL1Q5W0Q7 1092 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 ZNF513Q8N8E2 541 aaPredicted RBP10.52□□□□□ -0.72
RPGR-202ENST00000339363 GPATCH3Q96I76 525 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 PNKPQ96T60 521 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 UBXN6Q9BZV1 441 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 CACNA1FO60840 1977 aa10.52□□□□□ -0.72
RPGR-202ENST00000339363 HAND2P61296 217 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 TRIM65Q6PJ69 517 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 ZNF594Q96JF6 807 aaPredicted RBP10.52□□□□□ -0.73
RPGR-202ENST00000339363 MYD88Q99836 296 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 SH3GL3Q99963 347 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 KAT14Q9H8E8 782 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 MAP2K7O14733 419 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 ATP1A2P50993 1020 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 PIP4K2BP78356 416 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.73
RPGR-202ENST00000339363 COPS6Q7L5N1 327 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 XAGE3Q8WTP9 111 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 TBC1D31Q96DN5 1066 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 CAPZA3Q96KX2 299 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 KIF9Q9HAQ2 790 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 CDC23Q9UJX2 597 aa10.52□□□□□ -0.73
RPGR-202ENST00000339363 GOLGA6BA6NDN3 693 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 NEURL1BA8MQ27 555 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 PES1O00541 588 aaKnown RBP10.51□□□□□ -0.73
RPGR-202ENST00000339363 RPS6KA5O75582 802 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 GPTP24298 496 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 SNCBQ16143 134 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 PI16Q6UXB8 463 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 CCDC121Q6ZUS5 278 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 UBE3BQ7Z3V4 1068 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 TBC1D22AQ8WUA7 517 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 ZBTB10Q96DT7 871 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 LAMA4Q16363 1823 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 LTN1O94822 1766 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 MROH7-TTC4A0A0A0MT08 1334 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 STRCQ7RTU9 1775 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 VWA3AA6NCI4 1184 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 CUTAO60888 179 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 AP1G2O75843 785 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 STK11IPQ8N1F8 1099 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 TACO1Q9BSH4 297 aaKnown RBP10.51□□□□□ -0.73
RPGR-202ENST00000339363 KLC4Q9NSK0 619 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 L1RE1Q9UN81 338 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 RXRAP19793 462 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 KCNV1Q6PIU1 500 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 LRP10Q7Z4F1 713 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 EHD4Q9H223 541 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
RPGR-202ENST00000339363 IPO7O95373 1038 aaKnown RBP10.5□□□□□ -0.73
RPGR-202ENST00000339363 MCM3P25205 808 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 NCAPHQ15003 741 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 TNNI3KQ59H18 835 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 TOGARAM2Q6ZUX3 1019 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 RSRC2Q7L4I2 434 aaKnown RBP10.5□□□□□ -0.73
RPGR-202ENST00000339363 NBPF5PQ86XG9 351 aaPredicted RBP10.5□□□□□ -0.73
RPGR-202ENST00000339363 FMR1NBQ8N0W7 255 aaPredicted RBP10.5□□□□□ -0.73
RPGR-202ENST00000339363 INCENPQ9NQS7 918 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 FANCLQ9NW38 375 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 BAIAP2L1Q9UHR4 511 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 FPGT-TNNI3KV9GXZ4 949 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 HEG1Q9ULI3 1381 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 ALDH1L1O75891 902 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 IFT88Q13099 833 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 GCKRQ14397 625 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 CCDC40Q4G0X9 1142 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 IP6K1Q92551 441 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 DDX17Q92841 729 aaKnown RBP10.5□□□□□ -0.73
RPGR-202ENST00000339363 ZKSCAN4Q969J2 545 aaPredicted RBP10.5□□□□□ -0.73
RPGR-202ENST00000339363 SAAL1Q96ER3 474 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 ORAI2Q96SN7 254 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
RPGR-202ENST00000339363 RCOR1Q9UKL0 485 aa10.5□□□□□ -0.73
RPGR-202ENST00000339363 LRRIQ3A6PVS8 624 aaPredicted RBP10.49□□□□□ -0.73
RPGR-202ENST00000339363 CDC27P30260 824 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 CRYMQ14894 314 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 LINS1Q8NG48 757 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 KIAA1468Q9P260 1216 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 PLEKHG1Q9ULL1 1385 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 SALL1Q9NSC2 1324 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 CHD2O14647 1828 aaKnown RBP10.49□□□□□ -0.73
RPGR-202ENST00000339363 FOXN1O15353 648 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 BUB1BO60566 1050 aaPredicted RBP10.49□□□□□ -0.73
RPGR-202ENST00000339363 TUBBP07437 444 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 GGCXP38435 758 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 IRAK1P51617 712 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 RPUSD2Q8IZ73 545 aaKnown RBP10.49□□□□□ -0.73
RPGR-202ENST00000339363 POLD4Q9HCU8 107 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 RIPOR2Q9Y4F9 1068 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 M0R2C6 588 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 PDIA3P30101 505 aaKnown RBP10.49□□□□□ -0.73
RPGR-202ENST00000339363 PPFIA1Q13136 1202 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 LRRC24Q50LG9 513 aa10.49□□□□□ -0.73
RPGR-202ENST00000339363 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms