RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 FRMD3A2A2Y4 597 aa18.29■□□□□ 0.52
NEO1-202ENST00000339362 KIF22Q14807 665 aa18.29■□□□□ 0.52
NEO1-202ENST00000339362 PARD3BQ8TEW8 1205 aa18.29■□□□□ 0.52
NEO1-202ENST00000339362 MAP3K7CLP57077 242 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 ZBTB17Q13105 803 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 KRT79Q5XKE5 535 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 SDCCAG3Q96C92 435 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 RBSNQ9H1K0 784 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 EPB41P11171 864 aaKnown RBP18.28■□□□□ 0.52
NEO1-202ENST00000339362 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 TRIM35Q9UPQ4 493 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 PEX19P40855 299 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 OGFOD1Q8N543 542 aa18.28■□□□□ 0.52
NEO1-202ENST00000339362 ZBBXA8MT70 800 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 HMGB1P1B2RPK0 211 aaPredicted RBP18.27■□□□□ 0.52
NEO1-202ENST00000339362 ATP5J2-PTCD1G3V325 749 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 SLC9A5Q14940 896 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 ZKSCAN3Q9BRR0 538 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 ANKRD42Q8N9B4 389 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 HAUS2Q9NVX0 235 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 OATP04181 439 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 PPP4R1Q8TF05 950 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 CTNND2Q9UQB3 1225 aa18.27■□□□□ 0.52
NEO1-202ENST00000339362 ACTN4O43707 911 aaKnown RBP18.27■□□□□ 0.51
NEO1-202ENST00000339362 SPAG1Q07617 926 aa18.27■□□□□ 0.51
NEO1-202ENST00000339362 ANKRD20A3Q5VUR7 823 aa18.27■□□□□ 0.51
NEO1-202ENST00000339362 ZSCAN16Q9H4T2 348 aaPredicted RBP18.27■□□□□ 0.51
NEO1-202ENST00000339362 PPP2R3AQ06190 1150 aa18.27■□□□□ 0.51
NEO1-202ENST00000339362 LIN9Q5TKA1 542 aa18.27■□□□□ 0.51
NEO1-202ENST00000339362 ABTB1Q969K4 478 aaPredicted RBP18.26■□□□□ 0.51
NEO1-202ENST00000339362 RRP36Q96EU6 259 aaKnown RBP18.26■□□□□ 0.51
NEO1-202ENST00000339362 CAVIN2O95810 425 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 SERPINB6P35237 376 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 IFNL2Q8IZJ0 200 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 GPHNQ9NQX3 736 aaPredicted RBP18.26■□□□□ 0.51
NEO1-202ENST00000339362 C8orf58Q8NAV2 365 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 TCOF1Q13428 1488 aaKnown RBP18.26■□□□□ 0.51
NEO1-202ENST00000339362 RTL1A6NKG5 1358 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 GOLGA6CA6NDK9 693 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 GOLGA6DP0CG33 693 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 NBPF6Q5VWK0 638 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 NBPF4Q96M43 638 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 GOLGA6AQ9NYA3 693 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 PDE6AP16499 860 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 FAM200AQ8TCP9 573 aa18.26■□□□□ 0.51
NEO1-202ENST00000339362 SLC12A1Q13621 1099 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 MMEL1Q495T6 779 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 KRT19P08727 400 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 C8orf74Q6P047 294 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 UBL4BQ8N7F7 174 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 SYCP2Q9BX26 1530 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 KRT23Q9C075 422 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 CHPF2Q9P2E5 772 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 KRT2P35908 639 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 KCNG4Q8TDN1 519 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 PPIP5K1Q6PFW1 1433 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
NEO1-202ENST00000339362 FBXW4P57775 412 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 NUDCD3Q8IVD9 361 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 VPS37BQ9H9H4 285 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
NEO1-202ENST00000339362 NOP14P78316 857 aaKnown RBP18.25■□□□□ 0.51
NEO1-202ENST00000339362 CNGA4Q8IV77 575 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 TTC30BQ8N4P2 665 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 IFNKQ9P0W0 207 aa18.25■□□□□ 0.51
NEO1-202ENST00000339362 ANXA1P04083 346 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 TNNQ9UQP3 1299 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 LGSNQ5TDP6 509 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 USP48Q86UV5 1035 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 ACBD5Q5T8D3 534 aaPredicted RBP18.24■□□□□ 0.51
NEO1-202ENST00000339362 FAM71BQ8TC56 605 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 ZNF408Q9H9D4 720 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 DNAJC8O75937 253 aaPredicted RBP18.24■□□□□ 0.51
NEO1-202ENST00000339362 NPR1P16066 1061 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 IFRD2Q12894 506 aaPredicted RBP18.24■□□□□ 0.51
NEO1-202ENST00000339362 HDAC11Q96DB2 347 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 BCAP29Q9UHQ4 241 aa18.24■□□□□ 0.51
NEO1-202ENST00000339362 KLHL7Q8IXQ5 586 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 LRGUKQ96M69 825 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 ASIC2Q16515 512 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 PSMB7Q99436 277 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 PIK3C2GO75747 1445 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
NEO1-202ENST00000339362 STRN3Q13033 797 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 DCUN1D2Q6PH85 259 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 BRF1Q92994 677 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 NUCKS1Q9H1E3 243 aaKnown RBP18.23■□□□□ 0.51
NEO1-202ENST00000339362 GNGT2O14610 69 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 CTAGE3PQ8IX95 158 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 MRPS27Q92552 414 aaKnown RBP18.23■□□□□ 0.51
NEO1-202ENST00000339362 CSPG5O95196 566 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 MYO1AQ9UBC5 1043 aa18.23■□□□□ 0.51
NEO1-202ENST00000339362 PLCH2O75038 1416 aa18.22■□□□□ 0.51
NEO1-202ENST00000339362 SNRPA1P09661 255 aaKnown RBP18.22■□□□□ 0.51
NEO1-202ENST00000339362 ABCF3Q9NUQ8 709 aa18.22■□□□□ 0.51
NEO1-202ENST00000339362 CFAP43Q8NDM7 1665 aa18.22■□□□□ 0.51
NEO1-202ENST00000339362 TRAF5O00463 557 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms