RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 C1orf115Q9H7X2 142 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-202ENST00000337571 SRRDQ9UH36 339 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
CAPN3-202ENST00000337571 PDE4DIPQ5VU43 2346 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 MKI67P46013 3256 aaKnown RBP13.05□□□□□ -0.32
CAPN3-202ENST00000337571 TRIM75PA6NK02 468 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 MS4A1P11836 297 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 FCGRTP55899 365 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 SMCR8Q8TEV9 937 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-202ENST00000337571 ZNF384Q8TF68 577 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 TRIM47Q96LD4 638 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-202ENST00000337571 DHX36Q9H2U1 1008 aaKnown RBP13.05□□□□□ -0.32
CAPN3-202ENST00000337571 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 SLC45A1Q9Y2W3 748 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
CAPN3-202ENST00000337571 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
CAPN3-202ENST00000337571 IGSF3O75054 1194 aa13.04□□□□□ -0.32
CAPN3-202ENST00000337571 OSBPP22059 807 aa13.04□□□□□ -0.32
CAPN3-202ENST00000337571 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-202ENST00000337571 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-202ENST00000337571 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
CAPN3-202ENST00000337571 HERC5Q9UII4 1024 aaKnown RBP13.04□□□□□ -0.32
CAPN3-202ENST00000337571 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
CAPN3-202ENST00000337571 NOP58Q9Y2X3 529 aaKnown RBP13.04□□□□□ -0.32
CAPN3-202ENST00000337571 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
CAPN3-202ENST00000337571 RFX7Q2KHR2 1363 aa13.04□□□□□ -0.32
CAPN3-202ENST00000337571 BRCA2P51587 3418 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 FAM196BA6NMK8 535 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 SLURP2P0DP57 97 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 GRK4P32298 578 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 SPP2Q13103 211 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN3-202ENST00000337571 ERC1Q8IUD2 1116 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 FOXP4Q8IVH2 680 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-202ENST00000337571 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-202ENST00000337571 ZNF280CQ8ND82 737 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 AS3MTQ9HBK9 375 aa13.03□□□□□ -0.32
CAPN3-202ENST00000337571 ZSWIM8A7E2V4 1837 aa13.02□□□□□ -0.32
CAPN3-202ENST00000337571 USP17L5A8MUK1 530 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-202ENST00000337571 BCRP11274 1271 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 CTGFP29279 349 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 CAP2P40123 477 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 PPP4CP60510 307 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 UBXN2AP68543 259 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 HSP90AB4PQ58FF6 505 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 TGFBRAP1Q8WUH2 860 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 CCDC8Q9H0W5 538 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-202ENST00000337571 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 ADGRA2Q96PE1 1338 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 MGAMO43451 1857 aa13.02□□□□□ -0.33
CAPN3-202ENST00000337571 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
CAPN3-202ENST00000337571 RLBP1P12271 317 aa13.01□□□□□ -0.33
CAPN3-202ENST00000337571 ZAP70P43403 619 aa13.01□□□□□ -0.33
CAPN3-202ENST00000337571 MAPKAPK5Q8IW41 473 aa13.01□□□□□ -0.33
CAPN3-202ENST00000337571 PROCA1Q8NCQ7 364 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-202ENST00000337571 ZBED9Q6R2W3 1325 aa13.01□□□□□ -0.33
CAPN3-202ENST00000337571 COL2A1P02458 1487 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-202ENST00000337571 PHIPQ8WWQ0 1821 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 ATAD5Q96QE3 1844 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 IDH1O75874 414 aaKnown RBP13□□□□□ -0.33
CAPN3-202ENST00000337571 HLA-DOAP06340 250 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 ASNSP08243 561 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 CYP7A1P22680 504 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 PRKCZQ05513 592 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 MAP3K12Q12852 859 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 CCDC84Q86UT8 332 aaPredicted RBP13□□□□□ -0.33
CAPN3-202ENST00000337571 CERS3Q8IU89 383 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 SLAIN1Q8ND83 568 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 COA7Q96BR5 231 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
CAPN3-202ENST00000337571 RNF208Q9H0X6 261 aa13□□□□□ -0.33
CAPN3-202ENST00000337571 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
CAPN3-202ENST00000337571 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
CAPN3-202ENST00000337571 ADCY3O60266 1144 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 CCL5P13501 91 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 USP5P45974 858 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-202ENST00000337571 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-202ENST00000337571 HMGCS2P54868 508 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 MTFR1Q15390 333 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 TREML2Q5T2D2 321 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 AACSQ86V21 672 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 CHMP4BQ9H444 224 aaKnown RBP12.99□□□□□ -0.33
CAPN3-202ENST00000337571 PIH1D3Q9NQM4 214 aaKnown RBP12.99□□□□□ -0.33
CAPN3-202ENST00000337571 TMOD4Q9NZQ9 345 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
CAPN3-202ENST00000337571 PALD1Q9ULE6 856 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms