RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TXKP42681 527 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 CEP57Q86XR8 500 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 TEX11Q8IYF3 940 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 JAKMIP2Q96AA8 810 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 PFKFB1P16118 471 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 GSTA5Q7RTV2 222 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 CCDC25Q86WR0 208 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 CCDC114Q96M63 670 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 TTC14Q96N46 770 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 IMPG2Q9BZV3 1241 aa15.41■□□□□ 0.06
RTN4-202ENST00000337526 PNOCQ13519 176 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 UNC5CLQ8IV45 518 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 SLF1Q9BQI6 1058 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 FERMT1Q9BQL6 677 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 NUP58Q9BVL2 599 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 RASSF4Q9H2L5 321 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 RGS12O14924 1447 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 hCG_1642624A0A1W2PR95 340 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 AFAP1L1Q8TED9 768 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 PFKFB2O60825 505 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 CALCOCO2Q13137 446 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
RTN4-202ENST00000337526 MAGEA1P43355 309 aa15.4■□□□□ 0.06
RTN4-202ENST00000337526 RNASE9P60153 205 aaKnown RBP15.4■□□□□ 0.06
RTN4-202ENST00000337526 TTC31Q49AM3 519 aaPredicted RBP15.4■□□□□ 0.06
RTN4-202ENST00000337526 ADKP55263 362 aaKnown RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 AKNAD1Q5T1N1 836 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 DNAJC10Q8IXB1 793 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 SERTAD1Q9UHV2 236 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 CCNT1O60563 726 aaKnown RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 PLS1Q14651 629 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 CCDC6Q16204 474 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 ADCK5Q3MIX3 580 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 LONRF3Q496Y0 759 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 UTP14CQ5TAP6 766 aaKnown RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 SPATA5Q8NB90 893 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 CCDC26Q8TAB7 109 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 ATP7AQ04656 1500 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 HSPD1P10809 573 aaKnown RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 ERCC6LQ2NKX8 1250 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 UBLCP1Q8WVY7 318 aaPredicted RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 SECISBP2LQ93073 1101 aaKnown RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 MRFAP1L1Q96HT8 127 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 VPS54Q9P1Q0 977 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 SAP30BPQ9UHR5 308 aaKnown RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 NDUFAB1O14561 156 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 CETN3O15182 167 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 TTLL12Q14166 644 aaPredicted RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 VWA3BQ502W6 1294 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 MAP4K1Q92918 833 aa15.39■□□□□ 0.05
RTN4-202ENST00000337526 LSG1Q9H089 658 aaKnown RBP15.39■□□□□ 0.05
RTN4-202ENST00000337526 ETF1P62495 437 aaKnown RBP15.38■□□□□ 0.05
RTN4-202ENST00000337526 CCDC50Q8IVM0 306 aa15.38■□□□□ 0.05
RTN4-202ENST00000337526 GPCPD1Q9NPB8 672 aa15.38■□□□□ 0.05
RTN4-202ENST00000337526 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
RTN4-202ENST00000337526 ZBTB16Q05516 673 aa15.38■□□□□ 0.05
RTN4-202ENST00000337526 FMNL3Q8IVF7 1028 aa15.38■□□□□ 0.05
RTN4-202ENST00000337526 NAP1L4Q99733 375 aaKnown RBP15.38■□□□□ 0.05
RTN4-202ENST00000337526 LRWD1Q9UFC0 647 aa15.38■□□□□ 0.05
RTN4-202ENST00000337526 HPDP32754 393 aaPredicted RBP15.37■□□□□ 0.05
RTN4-202ENST00000337526 SLC9C1Q4G0N8 1177 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 AATFQ9NY61 560 aaKnown RBP eCLIP15.37■□□□□ 0.05
RTN4-202ENST00000337526 PCDHA7Q9UN72 937 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 RIMBP2O15034 1052 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 CMA1P23946 247 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 NONOQ15233 471 aaKnown RBP eCLIP15.37■□□□□ 0.058e-7■■□□□ 13.4
RTN4-202ENST00000337526 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 LRRC8AQ8IWT6 810 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 NOX5Q96PH1 765 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 WWC3Q9ULE0 1092 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 GOLGA6CA6NDK9 693 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 GOLGA6DP0CG33 693 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 CCDC84Q86UT8 332 aaPredicted RBP15.37■□□□□ 0.05
RTN4-202ENST00000337526 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 GOLGA6AQ9NYA3 693 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 HDAC9Q9UKV0 1011 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 FAM135BQ49AJ0 1406 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 EPB41P11171 864 aaKnown RBP15.37■□□□□ 0.05
RTN4-202ENST00000337526 CUL4AQ13619 759 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 NELFBQ8WX92 580 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 PSMB7Q99436 277 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 HAUS7Q99871 368 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 KCNK9Q9NPC2 374 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 SAMD15Q9P1V8 674 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 FRMD4BQ9Y2L6 1034 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 SAMD9Q5K651 1589 aa15.37■□□□□ 0.05
RTN4-202ENST00000337526 ERCC3P19447 782 aa15.36■□□□□ 0.05
RTN4-202ENST00000337526 HERC4Q5GLZ8 1057 aaPredicted RBP15.36■□□□□ 0.05
RTN4-202ENST00000337526 NOSTRINQ8IVI9 506 aa15.36■□□□□ 0.05
RTN4-202ENST00000337526 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
RTN4-202ENST00000337526 ZNF654Q8IZM8 581 aa15.36■□□□□ 0.05
RTN4-202ENST00000337526 BLZF1Q9H2G9 400 aa15.36■□□□□ 0.05
RTN4-202ENST00000337526 FGAP02671 866 aa15.36■□□□□ 0.05
RTN4-202ENST00000337526 ZBTB21Q9ULJ3 1066 aa15.36■□□□□ 0.05
RTN4-202ENST00000337526 KDRP35968 1356 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 OAS2P29728 719 aaKnown RBP15.35■□□□□ 0.05
RTN4-202ENST00000337526 EIF6P56537 245 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms