RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 SETDB2Q96T68 719 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
MSL3-202ENST00000337339 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
MSL3-202ENST00000337339 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 NPM3O75607 178 aaKnown RBP11.17□□□□□ -0.62
MSL3-202ENST00000337339 NLRP12P59046 1061 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 CATIPQ7Z7H3 387 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 DHX58Q96C10 678 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 NTSR2O95665 410 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 XBP1P17861 261 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 GNAT2P19087 354 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 STX17P56962 302 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 FANCCQ00597 558 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 PDCL2Q8N4E4 241 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 MRFAP1L1Q96HT8 127 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 COBLO75128 1261 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 ZNF174Q15697 407 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 NTRK3Q16288 839 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 FANCLQ9NW38 375 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 BAZ2BQ9UIF8 2168 aaKnown RBP11.16□□□□□ -0.62
MSL3-202ENST00000337339 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 CASP1P29466 404 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 LIFRP42702 1097 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 USP49Q70CQ1 688 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 SERTAD1Q9UHV2 236 aa11.16□□□□□ -0.62
MSL3-202ENST00000337339 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
MSL3-202ENST00000337339 TBC1D9BQ66K14 1250 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 DZIP1Q86YF9 867 aaKnown RBP11.15□□□□□ -0.62
MSL3-202ENST00000337339 CPLX3Q8WVH0 158 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.62
MSL3-202ENST00000337339 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
MSL3-202ENST00000337339 MCM9Q9NXL9 1143 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 PLEKHA8P1O95397 391 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 DEXIO95424 95 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 FMNL1O95466 1100 aaPredicted RBP11.15□□□□□ -0.62
MSL3-202ENST00000337339 IFNAR1P17181 557 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 PRDX5P30044 214 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 RPS8P62241 208 aaKnown RBP11.15□□□□□ -0.62
MSL3-202ENST00000337339 TICAM2Q86XR7 235 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 CRACR2BQ8N4Y2 399 aaPredicted RBP11.15□□□□□ -0.62
MSL3-202ENST00000337339 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
MSL3-202ENST00000337339 PES1O00541 588 aaKnown RBP11.15□□□□□ -0.63
MSL3-202ENST00000337339 MMP1P03956 469 aa11.15□□□□□ -0.63
MSL3-202ENST00000337339 CYP2D6P10635 497 aa11.15□□□□□ -0.63
MSL3-202ENST00000337339 SGMS1Q86VZ5 419 aa11.15□□□□□ -0.63
MSL3-202ENST00000337339 MAP7D2Q96T17 732 aa11.15□□□□□ -0.63
MSL3-202ENST00000337339 TOP1P11387 765 aaKnown RBP11.14□□□□□ -0.63
MSL3-202ENST00000337339 USP5P45974 858 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 TMTC2Q8N394 836 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 CTCFLQ8NI51 663 aaPredicted RBP11.14□□□□□ -0.63
MSL3-202ENST00000337339 SPATA31A1Q5TZJ5 1347 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 HIBADHP31937 336 aaKnown RBP11.14□□□□□ -0.63
MSL3-202ENST00000337339 NLRP5P59047 1200 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 MYL5Q02045 173 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 KRBA2Q6ZNG9 492 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 DPF2Q92785 391 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
MSL3-202ENST00000337339 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
MSL3-202ENST00000337339 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
MSL3-202ENST00000337339 VWA3AA6NCI4 1184 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
MSL3-202ENST00000337339 SMARCC1Q92922 1105 aaPredicted RBP11.13□□□□□ -0.63
MSL3-202ENST00000337339 SMARCE1Q969G3 411 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 CUTAO60888 179 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 U2AF2P26368 475 aaKnown RBP eCLIP11.13□□□□□ -0.63
MSL3-202ENST00000337339 CDC25AP30304 524 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 PTPAQ15257 358 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 RILPL1Q5EBL4 403 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 SARM1Q6SZW1 724 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 SYT10Q6XYQ8 523 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 EPSTI1Q96J88 318 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 CSRNP2Q9H175 543 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 BRMS1Q9HCU9 246 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 TRIM75PA6NK02 468 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 MCM7P33993 719 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 GSDMDP57764 484 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 RBM6P78332 1123 aaKnown RBP11.13□□□□□ -0.63
MSL3-202ENST00000337339 ALX1Q15699 326 aa11.13□□□□□ -0.63
MSL3-202ENST00000337339 METTL16Q86W50 562 aaKnown RBP11.13□□□□□ -0.63
MSL3-202ENST00000337339 FOXP4Q8IVH2 680 aaPredicted RBP11.13□□□□□ -0.63
MSL3-202ENST00000337339 SMYD4Q8IYR2 804 aaPredicted RBP11.13□□□□□ -0.63
MSL3-202ENST00000337339 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 IGSF3O75054 1194 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 PPP6R2O75170 966 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
MSL3-202ENST00000337339 MECOMQ03112 1051 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 POSTNQ15063 836 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 NOM1Q5C9Z4 860 aaKnown RBP11.12□□□□□ -0.63
MSL3-202ENST00000337339 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 UBE2Q2Q8WVN8 375 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms