RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 NOP56O00567 594 aaKnown RBP16.96■□□□□ 0.31
C9orf47-201ENST00000334490 SEMA3EO15041 775 aa16.96■□□□□ 0.31
C9orf47-201ENST00000334490 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
C9orf47-201ENST00000334490 JAK2O60674 1132 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 RBM10P98175 930 aaKnown RBP16.95■□□□□ 0.3
C9orf47-201ENST00000334490 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 CERKQ8TCT0 537 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
C9orf47-201ENST00000334490 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 ADGRB3O60242 1522 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 AS3MTQ9HBK9 375 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 NOD1Q9Y239 953 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 ELP1O95163 1332 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 CLRN2A0PK11 232 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 HLFQ16534 295 aa16.95■□□□□ 0.3
C9orf47-201ENST00000334490 GJD4Q96KN9 370 aaPredicted RBP16.95■□□□□ 0.3
C9orf47-201ENST00000334490 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
C9orf47-201ENST00000334490 GSTTP1A0A1W2PQM5 241 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
C9orf47-201ENST00000334490 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 UIMC1Q96RL1 719 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 TNKSO95271 1327 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 DDX39AO00148 427 aaKnown RBP16.94■□□□□ 0.3
C9orf47-201ENST00000334490 FAM160A1Q05DH4 1040 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 SETD1BQ9UPS6 1966 aaKnown RBP16.94■□□□□ 0.3
C9orf47-201ENST00000334490 UQCRHLA0A096LP55 91 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 UQCRHP07919 91 aa16.94■□□□□ 0.3
C9orf47-201ENST00000334490 ARID5AQ03989 594 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 ICA1Q05084 483 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 PTPN12Q05209 780 aaKnown RBP16.93■□□□□ 0.3
C9orf47-201ENST00000334490 NCAPH2Q6IBW4 605 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 LRRC47Q8N1G4 583 aaKnown RBP16.93■□□□□ 0.3
C9orf47-201ENST00000334490 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 LRWD1Q9UFC0 647 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 TTLL11Q8NHH1 800 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 KCNH3Q9ULD8 1083 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 RAD17O75943 681 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 CYLC1P35663 651 aaPredicted RBP16.93■□□□□ 0.3
C9orf47-201ENST00000334490 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 ATP8A2Q9NTI2 1148 aa16.93■□□□□ 0.3
C9orf47-201ENST00000334490 RPL13P26373 211 aaKnown RBP16.93■□□□□ 0.3
C9orf47-201ENST00000334490 GOLGA6L9A6NEM1 432 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 CCDC169A6NNP5 214 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 HARSP12081 509 aaKnown RBP16.92■□□□□ 0.3
C9orf47-201ENST00000334490 CMTR1Q8N1G2 835 aaKnown RBP16.92■□□□□ 0.3
C9orf47-201ENST00000334490 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 GLI2P10070 1586 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 NPR1P16066 1061 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 PTGS1P23219 599 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 GRAPQ13588 217 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 GRAPLQ8TC17 118 aaPredicted RBP16.92■□□□□ 0.3
C9orf47-201ENST00000334490 CCDC102AQ96A19 550 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 SMCO2A6NFE2 343 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 KCNQ2O43526 872 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 SPECC1Q5M775 1068 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 SNX29Q8TEQ0 813 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
C9orf47-201ENST00000334490 TRAF5O00463 557 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 FANCBQ8NB91 859 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 CRACR2AQ9BSW2 395 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 GBP3Q9H0R5 595 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 ANTXR1Q9H6X2 564 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 JCADQ9P266 1359 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 DKC1O60832 514 aaKnown RBP eCLIP16.91■□□□□ 0.3
C9orf47-201ENST00000334490 GNG11P61952 73 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 TTLL6Q8N841 843 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 UNC13BO14795 1591 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 GBP2P32456 591 aaPredicted RBP16.91■□□□□ 0.3
C9orf47-201ENST00000334490 ADD1P35611 737 aaKnown RBP16.91■□□□□ 0.3
C9orf47-201ENST00000334490 SMTNP53814 917 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 PDE4DQ08499 809 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 DPH6Q7L8W6 267 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 JADE2Q9NQC1 790 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 KLRF2D3W0D1 207 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 ME3Q16798 604 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
C9orf47-201ENST00000334490 CCDC186Q7Z3E2 898 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 CDC42BPBQ9Y5S2 1711 aa16.91■□□□□ 0.3
C9orf47-201ENST00000334490 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
C9orf47-201ENST00000334490 H7C1W4 665 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 GOLGA8HP0CJ92 632 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 ALAS1P13196 640 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 CC2D2BQ6DHV5 1058 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 CSRNP1Q96S65 589 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 C1orf167Q5SNV9 1468 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
C9orf47-201ENST00000334490 SNW1Q13573 536 aaKnown RBP16.9■□□□□ 0.3
C9orf47-201ENST00000334490 ZMYM1Q5SVZ6 1142 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 ZNF274Q96GC6 653 aaPredicted RBP16.9■□□□□ 0.3
C9orf47-201ENST00000334490 TULP4Q9NRJ4 1543 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 IFI16Q16666 785 aaKnown RBP16.9■□□□□ 0.3
C9orf47-201ENST00000334490 ABCB5Q2M3G0 1257 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms