RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CLEC10AQ8IUN9 316 aa19.64■□□□□ 0.74
SHOX-201ENST00000334060 GPHNQ9NQX3 736 aaPredicted RBP19.64■□□□□ 0.74
SHOX-201ENST00000334060 ZNF213O14771 459 aa19.64■□□□□ 0.73
SHOX-201ENST00000334060 ENTPD3O75355 529 aa19.64■□□□□ 0.73
SHOX-201ENST00000334060 MOB2Q70IA6 237 aa19.64■□□□□ 0.73
SHOX-201ENST00000334060 KRT26Q7Z3Y9 468 aa19.64■□□□□ 0.73
SHOX-201ENST00000334060 LRRC2Q9BYS8 371 aa19.64■□□□□ 0.73
SHOX-201ENST00000334060 ARPP21Q9UBL0 812 aaPredicted RBP19.64■□□□□ 0.73
SHOX-201ENST00000334060 ZMYM6O95789 1325 aa19.64■□□□□ 0.73
SHOX-201ENST00000334060 KIF3CO14782 793 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 GABPAQ06546 454 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 IMMTQ16891 758 aaKnown RBP19.63■□□□□ 0.73
SHOX-201ENST00000334060 SBK1Q52WX2 424 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 FAM47AQ5JRC9 791 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 RRP12Q5JTH9 1297 aaKnown RBP19.63■□□□□ 0.73
SHOX-201ENST00000334060 GIMAP6Q6P9H5 292 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 KCNB2Q92953 911 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 LARP6Q9BRS8 491 aaKnown RBP19.63■□□□□ 0.73
SHOX-201ENST00000334060 B4E1Z4 1266 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 NMT2O60551 498 aa19.63■□□□□ 0.73
SHOX-201ENST00000334060 YY1P25490 414 aa19.62■□□□□ 0.73
SHOX-201ENST00000334060 SHMT1P34896 483 aa19.62■□□□□ 0.73
SHOX-201ENST00000334060 RBM25P49756 843 aaKnown RBP19.62■□□□□ 0.73
SHOX-201ENST00000334060 CYB5R4Q7L1T6 521 aa19.62■□□□□ 0.73
SHOX-201ENST00000334060 CCDC84Q86UT8 332 aaPredicted RBP19.62■□□□□ 0.73
SHOX-201ENST00000334060 ZKSCAN3Q9BRR0 538 aa19.62■□□□□ 0.73
SHOX-201ENST00000334060 GPBP1L1Q9HC44 474 aaPredicted RBP19.62■□□□□ 0.73
SHOX-201ENST00000334060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHOX-201ENST00000334060 CD2BP2O95400 341 aaKnown RBP19.61■□□□□ 0.73
SHOX-201ENST00000334060 CDK8P49336 464 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 ANTXR2P58335 489 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 FAM83AQ86UY5 434 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 DCPSQ96C86 337 aaKnown RBP19.61■□□□□ 0.73
SHOX-201ENST00000334060 JAKMIP1Q96N16 626 aaKnown RBP19.61■□□□□ 0.73
SHOX-201ENST00000334060 SENP2Q9HC62 589 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 GDF11O95390 407 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 FKBP1CQ5VVH2 108 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 CERS3Q8IU89 383 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 ZNF784Q8NCA9 323 aaPredicted RBP19.61■□□□□ 0.73
SHOX-201ENST00000334060 TOMM22Q9NS69 142 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.61■□□□□ 0.73
SHOX-201ENST00000334060 ANAPC4Q9UJX5 808 aa19.61■□□□□ 0.73
SHOX-201ENST00000334060 ROBO3Q96MS0 1386 aa19.6■□□□□ 0.73
SHOX-201ENST00000334060 DTNBO60941 627 aa19.6■□□□□ 0.73
SHOX-201ENST00000334060 AKNAD1Q5T1N1 836 aa19.6■□□□□ 0.73
SHOX-201ENST00000334060 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
SHOX-201ENST00000334060 RASA1P20936 1047 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 MMP14P50281 582 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 C16orf86Q6ZW13 317 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 PNMA8AQ86V59 439 aaPredicted RBP19.59■□□□□ 0.73
SHOX-201ENST00000334060 APOBEC3FQ8IUX4 373 aaKnown RBP19.59■□□□□ 0.73
SHOX-201ENST00000334060 STAG1Q8WVM7 1258 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 CDCA5Q96FF9 252 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 DDRGK1Q96HY6 314 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 CTNNA3Q9UI47 895 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 SERPINB13Q9UIV8 391 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 KDM4AO75164 1064 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 AKR1B1P15121 316 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 SULF1Q8IWU6 871 aa19.59■□□□□ 0.73
SHOX-201ENST00000334060 PITPNM2Q9BZ72 1349 aa19.58■□□□□ 0.73
SHOX-201ENST00000334060 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.73
SHOX-201ENST00000334060 MB21D2Q8IYB1 491 aaPredicted RBP19.58■□□□□ 0.73
SHOX-201ENST00000334060 CHMP4CQ96CF2 233 aa19.58■□□□□ 0.73
SHOX-201ENST00000334060 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.58■□□□□ 0.73
SHOX-201ENST00000334060 ZNF408Q9H9D4 720 aa19.58■□□□□ 0.73
SHOX-201ENST00000334060 PI4KBQ9UBF8 816 aa19.58■□□□□ 0.73
SHOX-201ENST00000334060 COL2A1P02458 1487 aaPredicted RBP19.57■□□□□ 0.72
SHOX-201ENST00000334060 INPP5BP32019 993 aa19.57■□□□□ 0.72
SHOX-201ENST00000334060 TNNI2P48788 182 aa19.57■□□□□ 0.72
SHOX-201ENST00000334060 TNFAIP1Q13829 316 aa19.57■□□□□ 0.72
SHOX-201ENST00000334060 MFSD6Q6ZSS7 791 aa19.57■□□□□ 0.72
SHOX-201ENST00000334060 NOL8Q76FK4 1167 aaKnown RBP19.57■□□□□ 0.72
SHOX-201ENST00000334060 RASGRP2Q7LDG7 609 aa19.57■□□□□ 0.72
SHOX-201ENST00000334060 TTC6Q86TZ1 520 aa19.57■□□□□ 0.72
SHOX-201ENST00000334060 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
SHOX-201ENST00000334060 ZC3H15Q8WU90 426 aaKnown RBP19.57■□□□□ 0.72
SHOX-201ENST00000334060 DHX36Q9H2U1 1008 aaKnown RBP19.57■□□□□ 0.72
SHOX-201ENST00000334060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.57■□□□□ 0.72
SHOX-201ENST00000334060 ZSWIM5Q9P217 1185 aa19.57■□□□□ 0.72
SHOX-201ENST00000334060 RANBP6O60518 1105 aaKnown RBP19.56■□□□□ 0.72
SHOX-201ENST00000334060 HLA-DOAP06340 250 aa19.56■□□□□ 0.72
SHOX-201ENST00000334060 FGRP09769 529 aa19.56■□□□□ 0.72
SHOX-201ENST00000334060 DEKP35659 375 aaKnown RBP19.56■□□□□ 0.72
SHOX-201ENST00000334060 TSGA10IPQ3SY00 556 aa19.56■□□□□ 0.72
SHOX-201ENST00000334060 LDHDQ86WU2 507 aa19.56■□□□□ 0.72
SHOX-201ENST00000334060 UPF2Q9HAU5 1272 aaKnown RBP19.56■□□□□ 0.72
SHOX-201ENST00000334060 PCNTO95613 3336 aa19.56■□□□□ 0.72
SHOX-201ENST00000334060 PHF20L1A8MW92 1017 aa19.55■□□□□ 0.72
SHOX-201ENST00000334060 METTL16Q86W50 562 aaKnown RBP19.55■□□□□ 0.72
SHOX-201ENST00000334060 NEK1Q96PY6 1258 aa19.55■□□□□ 0.72
SHOX-201ENST00000334060 IL17RBQ9NRM6 502 aa19.55■□□□□ 0.72
SHOX-201ENST00000334060 ITGBL1O95965 494 aaPredicted RBP19.55■□□□□ 0.72
SHOX-201ENST00000334060 ZKSCAN1P17029 563 aaPredicted RBP19.55■□□□□ 0.72
SHOX-201ENST00000334060 GUCY1A2P33402 732 aa19.55■□□□□ 0.72
SHOX-201ENST00000334060 RAB11FIP4Q86YS3 637 aa19.55■□□□□ 0.72
SHOX-201ENST00000334060 ZKSCAN4Q969J2 545 aaPredicted RBP19.55■□□□□ 0.72
SHOX-201ENST00000334060 EHD4Q9H223 541 aa19.55■□□□□ 0.72
SHOX-201ENST00000334060 PRKCSHP14314 528 aaPredicted RBP19.54■□□□□ 0.72
SHOX-201ENST00000334060 MCCP23508 829 aa19.54■□□□□ 0.72
SHOX-201ENST00000334060 RNF20Q5VTR2 975 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms