RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 KDM4AO75164 1064 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 PRDM1O75626 825 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 Q6ZUG5 572 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 CYB5R4Q7L1T6 521 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 ZFPM1Q8IX07 1006 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 DYNLL2Q96FJ2 89 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 AGXT2Q9BYV1 514 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 TOMM22Q9NS69 142 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 GPRC5DQ9NZD1 345 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 ZNF70Q9UC06 446 aaPredicted RBP14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 DAXXQ9UER7 740 aaPredicted RBP14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 ATRNL1Q5VV63 1379 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 ENTPD3O75355 529 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 PDE4BQ07343 736 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 NBPF9Q3BBW0 867 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 RRP12Q5JTH9 1297 aaKnown RBP14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 TTC6Q86TZ1 520 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 FBXL16Q8N461 479 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 LARP6Q9BRS8 491 aaKnown RBP14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 LIMCH1Q9UPQ0 1083 aa14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 ZC3H4Q9UPT8 1303 aaKnown RBP14.26□□□□□ -0.13
TRIM49B-201ENST00000332682 MYO1BO43795 1136 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 DDNO94850 711 aaPredicted RBP14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 TCP10Q12799 353 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 KIF4BQ2VIQ3 1234 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 FKBP1CQ5VVH2 108 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 C16orf86Q6ZW13 317 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 SAMD7Q7Z3H4 446 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 SLC44A5Q8NCS7 719 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 ESR2Q92731 530 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 BRF1Q92994 677 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 MYH8P13535 1937 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 CNTNAP1P78357 1384 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 DDTLA6NHG4 134 aaPredicted RBP14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 LARGE1O95461 756 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 FGD1P98174 961 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 GABPAQ06546 454 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 TBC1D10BQ4KMP7 808 aaPredicted RBP14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 SH3BP5LQ7L8J4 393 aa14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 DHX36Q9H2U1 1008 aaKnown RBP14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
TRIM49B-201ENST00000332682 TCP10L2B9ZVM9 353 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 H7C1D1 291 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 SH2B2O14492 632 aaPredicted RBP14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 HLA-DOAP06340 250 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 NT5C2P49902 561 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 TMEM87BQ96K49 555 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 EHD4Q9H223 541 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 VEZTQ9HBM0 779 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 SERPINB13Q9UIV8 391 aa14.24□□□□□ -0.13
TRIM49B-201ENST00000332682 RANBP6O60518 1105 aaKnown RBP14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 EPS15P42566 896 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 CDK8P49336 464 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 EVCP57679 992 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 CUL4AQ13619 759 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 ME3Q16798 604 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 FAM83AQ86UY5 434 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 TRPM4Q8TD43 1214 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 IGDCC4Q8TDY8 1250 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 MTA3Q9BTC8 594 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 SH2B1Q9NRF2 756 aaPredicted RBP14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 ANGEL1Q9UNK9 670 aaKnown RBP14.23□□□□□ -0.13
TRIM49B-201ENST00000332682 ASTN2O75129 1339 aaPredicted RBP14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 RASA1P20936 1047 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 APOBRQ0VD83 1088 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 ZSCAN29Q8IWY8 852 aaPredicted RBP14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 FAM151AQ8WW52 585 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 ZKSCAN3Q9BRR0 538 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 DNAJC18Q9H819 358 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 LY9Q9HBG7 655 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 PI4KBQ9UBF8 816 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 TNKSO95271 1327 aa14.22□□□□□ -0.13
TRIM49B-201ENST00000332682 TSPY2A6NKD2 308 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 IFIT3O14879 490 aaKnown RBP14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 LIFRP42702 1097 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 ST3GAL1Q11201 340 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 SART3Q15020 963 aaKnown RBP14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 SEC23AQ15436 765 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 FAM47AQ5JRC9 791 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 UBAC1Q9BSL1 405 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 SWAP70Q9UH65 585 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
TRIM49B-201ENST00000332682 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 SLURP2P0DP57 97 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 LMOD1P29536 600 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 SHMT1P34896 483 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 TFAP4Q01664 338 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms