RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RTN1Q16799 776 aa18.46■□□□□ 0.55
PDGFB-201ENST00000331163 HLA-DOAP06340 250 aa18.46■□□□□ 0.54
PDGFB-201ENST00000331163 PLCD1P51178 756 aa18.46■□□□□ 0.54
PDGFB-201ENST00000331163 SPICE1Q8N0Z3 855 aa18.46■□□□□ 0.54
PDGFB-201ENST00000331163 NLGN2Q8NFZ4 835 aa18.46■□□□□ 0.54
PDGFB-201ENST00000331163 COA1Q9GZY4 146 aa18.46■□□□□ 0.54
PDGFB-201ENST00000331163 TAOK3Q9H2K8 898 aa18.46■□□□□ 0.54
PDGFB-201ENST00000331163 KCNJ14Q9UNX9 436 aa18.45■□□□□ 0.54
PDGFB-201ENST00000331163 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
PDGFB-201ENST00000331163 MARCH6O60337 910 aa18.45■□□□□ 0.54
PDGFB-201ENST00000331163 PDCP20941 246 aa18.45■□□□□ 0.54
PDGFB-201ENST00000331163 SAFBQ15424 915 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDGFB-201ENST00000331163 TBC1D22AQ8WUA7 517 aa18.45■□□□□ 0.54
PDGFB-201ENST00000331163 ALG1Q9BT22 464 aa18.45■□□□□ 0.54
PDGFB-201ENST00000331163 CLEC11AQ9Y240 323 aa18.45■□□□□ 0.54
PDGFB-201ENST00000331163 NFIAQ12857 509 aa18.44■□□□□ 0.54
PDGFB-201ENST00000331163 CCDC84Q86UT8 332 aaPredicted RBP18.44■□□□□ 0.54
PDGFB-201ENST00000331163 KLHL40Q2TBA0 621 aa18.44■□□□□ 0.54
PDGFB-201ENST00000331163 TDRD7Q8NHU6 1098 aaKnown RBP18.44■□□□□ 0.54
PDGFB-201ENST00000331163 HDAC9Q9UKV0 1011 aa18.44■□□□□ 0.54
PDGFB-201ENST00000331163 ATP6V1DQ9Y5K8 247 aa18.44■□□□□ 0.54
PDGFB-201ENST00000331163 V9GY48 417 aaPredicted RBP18.44■□□□□ 0.54
PDGFB-201ENST00000331163 COL22A1Q8NFW1 1626 aaPredicted RBP18.44■□□□□ 0.54
PDGFB-201ENST00000331163 CREBRFQ8IUR6 639 aa18.44■□□□□ 0.54
PDGFB-201ENST00000331163 FEZ1Q99689 392 aa18.44■□□□□ 0.54
PDGFB-201ENST00000331163 ARFGEF2Q9Y6D5 1785 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
PDGFB-201ENST00000331163 CRKP46108 304 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 CTR9Q6PD62 1173 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 FTOQ9C0B1 505 aaKnown RBP eCLIP18.43■□□□□ 0.54
PDGFB-201ENST00000331163 UBA5Q9GZZ9 404 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
PDGFB-201ENST00000331163 MYO1BO43795 1136 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 EAPPQ56P03 285 aaPredicted RBP18.43■□□□□ 0.54
PDGFB-201ENST00000331163 CNNM2Q9H8M5 875 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 SPON1Q9HCB6 807 aa18.43■□□□□ 0.54
PDGFB-201ENST00000331163 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 PTMSP20962 102 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
PDGFB-201ENST00000331163 STK38Q15208 465 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 CFAP100Q494V2 611 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 DAGLAQ9Y4D2 1042 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 SAMD7Q7Z3H4 446 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDGFB-201ENST00000331163 SPATA32Q96LK8 384 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 BTAF1O14981 1849 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 MARCKSP29966 332 aaPredicted RBP18.42■□□□□ 0.54
PDGFB-201ENST00000331163 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 ZNF830Q96NB3 372 aaPredicted RBP18.42■□□□□ 0.54
PDGFB-201ENST00000331163 MTFR1LQ9H019 292 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 FZD1Q9UP38 647 aa18.42■□□□□ 0.54
PDGFB-201ENST00000331163 PSMD14O00487 310 aa18.41■□□□□ 0.54
PDGFB-201ENST00000331163 RASGRP2Q7LDG7 609 aa18.41■□□□□ 0.54
PDGFB-201ENST00000331163 ZSCAN22P10073 491 aaPredicted RBP18.41■□□□□ 0.54
PDGFB-201ENST00000331163 CRY2Q49AN0 593 aa18.41■□□□□ 0.54
PDGFB-201ENST00000331163 HEATR3Q7Z4Q2 680 aa18.41■□□□□ 0.54
PDGFB-201ENST00000331163 CERS5Q8N5B7 392 aa18.41■□□□□ 0.54
PDGFB-201ENST00000331163 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
PDGFB-201ENST00000331163 SHTN1A0MZ66 631 aa18.4■□□□□ 0.54
PDGFB-201ENST00000331163 AK9Q5TCS8 1911 aa18.4■□□□□ 0.54
PDGFB-201ENST00000331163 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
PDGFB-201ENST00000331163 PLCG2P16885 1265 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 UPF1Q92900 1129 aaKnown RBP eCLIP18.39■□□□□ 0.53
PDGFB-201ENST00000331163 PPP1R9BQ96SB3 815 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 FHDC1Q9C0D6 1143 aaPredicted RBP18.39■□□□□ 0.53
PDGFB-201ENST00000331163 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 SEMA3EO15041 775 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 DDIT3P35638 169 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 SNAP25P60880 206 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 KRT85P78386 507 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 PODNQ7Z5L7 613 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 TTC14Q96N46 770 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 CTDP1Q9Y5B0 961 aaPredicted RBP18.39■□□□□ 0.53
PDGFB-201ENST00000331163 TCRBV5S4A2TA0A5A2 114 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 APOA5Q6Q788 366 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 GTF3C6Q969F1 213 aa18.39■□□□□ 0.53
PDGFB-201ENST00000331163 NLRP5P59047 1200 aa18.38■□□□□ 0.53
PDGFB-201ENST00000331163 TTC6Q86TZ1 520 aa18.38■□□□□ 0.53
PDGFB-201ENST00000331163 ZNF384Q8TF68 577 aa18.38■□□□□ 0.53
PDGFB-201ENST00000331163 NUP98P52948 1817 aa18.38■□□□□ 0.53
PDGFB-201ENST00000331163 SLC16A2P36021 539 aa18.38■□□□□ 0.53
PDGFB-201ENST00000331163 PDILTQ8N807 584 aa18.38■□□□□ 0.53
PDGFB-201ENST00000331163 ZNF287Q9HBT7 754 aa18.38■□□□□ 0.53
PDGFB-201ENST00000331163 HOXA10P31260 410 aaPredicted RBP18.37■□□□□ 0.53
PDGFB-201ENST00000331163 ISM2Q6H9L7 571 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 USP17L2Q6R6M4 530 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 ZFPM1Q8IX07 1006 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 GPKOWQ92917 476 aaPredicted RBP eCLIP18.37■□□□□ 0.53
PDGFB-201ENST00000331163 PRMT6Q96LA8 375 aaPredicted RBP18.37■□□□□ 0.53
PDGFB-201ENST00000331163 GADD45BO75293 160 aaPredicted RBP18.37■□□□□ 0.53
PDGFB-201ENST00000331163 ANTXR2P58335 489 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 SPECC1Q5M775 1068 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 ZSCAN10Q96SZ4 725 aaPredicted RBP18.37■□□□□ 0.53
PDGFB-201ENST00000331163 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
PDGFB-201ENST00000331163 MROH7-TTC4A0A0A0MT08 1334 aa18.37■□□□□ 0.53
PDGFB-201ENST00000331163 F13A1P00488 732 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms