RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 MKRN1Q9UHC7 482 aaKnown RBP17.43■□□□□ 0.38
TPM3-205ENST00000328159 CFAP45Q9UL16 551 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 TNKSO95271 1327 aa17.43■□□□□ 0.38
TPM3-205ENST00000328159 PRDM1O75626 825 aa17.42■□□□□ 0.38
TPM3-205ENST00000328159 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
TPM3-205ENST00000328159 EVX2Q03828 476 aa17.42■□□□□ 0.38
TPM3-205ENST00000328159 OTUD7BQ6GQQ9 843 aa17.42■□□□□ 0.38
TPM3-205ENST00000328159 LRSAM1Q6UWE0 723 aa17.42■□□□□ 0.38
TPM3-205ENST00000328159 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
TPM3-205ENST00000328159 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.382e-8■■□□□ 13.1
TPM3-205ENST00000328159 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
TPM3-205ENST00000328159 RTN1Q16799 776 aa17.41■□□□□ 0.38
TPM3-205ENST00000328159 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
TPM3-205ENST00000328159 ATL3Q6DD88 541 aa17.41■□□□□ 0.38
TPM3-205ENST00000328159 STYK1Q6J9G0 422 aa17.41■□□□□ 0.38
TPM3-205ENST00000328159 ZNF654Q8IZM8 581 aa17.41■□□□□ 0.38
TPM3-205ENST00000328159 ZNF396Q96N95 335 aaPredicted RBP17.41■□□□□ 0.38
TPM3-205ENST00000328159 STK36Q9NRP7 1315 aa17.41■□□□□ 0.38
TPM3-205ENST00000328159 GPR75-ASB3A0A0A6YYF3 556 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 H0YIN7 160 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 USP17L8P0C7I0 530 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 BTDP43251 543 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 GTF2IP78347 998 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 IQCA1Q86XH1 822 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 ENAHQ8N8S7 591 aaPredicted RBP17.4■□□□□ 0.38
TPM3-205ENST00000328159 PHKBQ93100 1093 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 ALG1Q9BT22 464 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 FMNL1O95466 1100 aaPredicted RBP17.4■□□□□ 0.38
TPM3-205ENST00000328159 IFNAR1P17181 557 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 PDE4BQ07343 736 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
TPM3-205ENST00000328159 C12orf60Q5U649 245 aa17.4■□□□□ 0.38
TPM3-205ENST00000328159 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
TPM3-205ENST00000328159 FAM163AQ96GL9 167 aaPredicted RBP17.4■□□□□ 0.38
TPM3-205ENST00000328159 GAKO14976 1311 aa17.39■□□□□ 0.37
TPM3-205ENST00000328159 CCDC196A0A1B0GTZ2 297 aa17.39■□□□□ 0.37
TPM3-205ENST00000328159 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.37
TPM3-205ENST00000328159 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
TPM3-205ENST00000328159 PANK2Q9BZ23 570 aa17.39■□□□□ 0.37
TPM3-205ENST00000328159 GJB4Q9NTQ9 266 aa17.39■□□□□ 0.37
TPM3-205ENST00000328159 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 SLX4Q8IY92 1834 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 GOLGA6L4A6NEF3 574 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 PLCG2P16885 1265 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 IFIT1BQ5T764 474 aaKnown RBP17.38■□□□□ 0.37
TPM3-205ENST00000328159 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 FBXO41Q8TF61 875 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 NUP133Q8WUM0 1156 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 AIFM3Q96NN9 605 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 EYA3Q99504 573 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 SLC26A6Q9BXS9 759 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
TPM3-205ENST00000328159 PPP2R5BQ15173 497 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 BRAPQ7Z569 592 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 USP28Q96RU2 1077 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 RCOR1Q9UKL0 485 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 SUGT1Q9Y2Z0 365 aa17.38■□□□□ 0.37
TPM3-205ENST00000328159 NT5C2P49902 561 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 KIF23Q02241 960 aaPredicted RBP17.37■□□□□ 0.37
TPM3-205ENST00000328159 CEBPZQ03701 1054 aaKnown RBP17.37■□□□□ 0.37
TPM3-205ENST00000328159 SLC4A8Q2Y0W8 1093 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 FAM47AQ5JRC9 791 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 MAPKAPK5Q8IW41 473 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 WASF1Q92558 559 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 FBXW7Q969H0 707 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 PGBD1Q96JS3 809 aa17.37■□□□□ 0.37
TPM3-205ENST00000328159 DDX60LQ5H9U9 1706 aaKnown RBP17.37■□□□□ 0.37
TPM3-205ENST00000328159 CHRNA5P30532 468 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 BAG6P46379 1132 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 KRT40Q6A162 431 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 TRIM22Q8IYM9 498 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 CRACR2BQ8N4Y2 399 aaPredicted RBP17.36■□□□□ 0.37
TPM3-205ENST00000328159 FTOQ9C0B1 505 aaKnown RBP eCLIP17.36■□□□□ 0.377e-6■■□□□ 12.9
TPM3-205ENST00000328159 RBSNQ9H1K0 784 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 MYH6P13533 1939 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 FOCADQ5VW36 1801 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 MYH1P12882 1939 aa17.36■□□□□ 0.37
TPM3-205ENST00000328159 KIF28PB7ZC32 967 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 G3V3G9 751 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 CALM1P0DP23 149 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 CALM2P0DP24 149 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 CALM3P0DP25 149 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 LIG1P18858 919 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 RHBDL3P58872 404 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
TPM3-205ENST00000328159 TRIM29Q14134 588 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 DCAF8Q5TAQ9 597 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 NBPF11Q86T75 865 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 CERS5Q8N5B7 392 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 DYNLL2Q96FJ2 89 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 DAGLAQ9Y4D2 1042 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 TSPY2A6NKD2 308 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 DDAH1O94760 285 aa17.35■□□□□ 0.37
TPM3-205ENST00000328159 POLR3DP05423 398 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms