RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 NAPBQ9H115 298 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 ZNF18P17022 549 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 PTPREP23469 700 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 MDM2Q00987 491 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-201ENST00000326956 SART3Q15020 963 aaKnown RBP16.66■□□□□ 0.26
SSBP3-201ENST00000326956 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
SSBP3-201ENST00000326956 IGDCC4Q8TDY8 1250 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 KIFC2Q96AC6 838 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 KCNJ14Q9UNX9 436 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 ERLIN1O75477 346 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 GRAMD1CQ8IYS0 662 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 CEP112Q8N8E3 955 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
SSBP3-201ENST00000326956 STK36Q9NRP7 1315 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 ERICH2A1L162 156 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 FMNL1O95466 1100 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-201ENST00000326956 MMP1P03956 469 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 LMAN1P49257 510 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 PLCD1P51178 756 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 MORC3Q14149 939 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 KIF6Q6ZMV9 814 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 SGMS1Q86VZ5 419 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 SOWAHDA6NJG2 315 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 MTF1Q14872 753 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 SRGAP1Q7Z6B7 1085 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 PANX2Q96RD6 677 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 FUT8Q9BYC5 575 aa16.65■□□□□ 0.26
SSBP3-201ENST00000326956 UBE2Q2LH0YL09 131 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 IFNAR1P17181 557 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 ERCC5P28715 1186 aaPredicted RBP16.64■□□□□ 0.25
SSBP3-201ENST00000326956 LIFRP42702 1097 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 MCM6Q14566 821 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 RTN1Q16799 776 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 NAA15Q9BXJ9 866 aaKnown RBP16.64■□□□□ 0.25
SSBP3-201ENST00000326956 IRX2Q9BZI1 471 aaPredicted RBP16.64■□□□□ 0.25
SSBP3-201ENST00000326956 MRPL44Q9H9J2 332 aaKnown RBP16.64■□□□□ 0.25
SSBP3-201ENST00000326956 FBXO2Q9UK22 296 aaPredicted RBP16.64■□□□□ 0.25
SSBP3-201ENST00000326956 EIF3JO75822 258 aaKnown RBP16.64■□□□□ 0.25
SSBP3-201ENST00000326956 PDE6AP16499 860 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 GRIN1Q05586 938 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 NR1I3Q14994 352 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 ZSCAN26Q16670 478 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 HOMEZQ8IX15 550 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 UBXN6Q9BZV1 441 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
SSBP3-201ENST00000326956 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 ZNF569Q5MCW4 686 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 FOXP1Q9H334 677 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 PIH1D3Q9NQM4 214 aaKnown RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 FAM217BQ9NTX9 383 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 MAP3K15Q6ZN16 1313 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 STX17P56962 302 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 MFSD6Q6ZSS7 791 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 NKX2-3Q8TAU0 364 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 KRT23Q9C075 422 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 CDC23Q9UJX2 597 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 CCDC196A0A1B0GTZ2 297 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 TULP2O00295 520 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 AFMP43652 599 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 SARSP49591 514 aaKnown RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 AKAP17AQ02040 695 aaKnown RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
SSBP3-201ENST00000326956 CTAGE1Q96RT6 745 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 PCDHB6Q9Y5E3 794 aa16.63■□□□□ 0.25
SSBP3-201ENST00000326956 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 C4BP0C0L5 1744 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 A0A1B0GTH6 734 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 ERVV-2B6SEH9 535 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 ITGA6P23229 1130 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-201ENST00000326956 RBL2Q08999 1139 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 WTAPQ15007 396 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 HDXQ7Z353 690 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
SSBP3-201ENST00000326956 EXOC4Q96A65 974 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 ADAM21Q9UKJ8 722 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
SSBP3-201ENST00000326956 ADGRG1Q9Y653 693 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 CTAGE9A4FU28 777 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 TEX33O43247 280 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 DEXIO95424 95 aa16.62■□□□□ 0.25
SSBP3-201ENST00000326956 ATF3P18847 181 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms