RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 CERS3Q8IU89 383 aa21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 ERC1Q8IUD2 1116 aa21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 PROCA1Q8NCQ7 364 aaPredicted RBP21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 C1orf115Q9H7X2 142 aa21.67■■□□□ 1.06
PTPMT1-201ENST00000326656 CTGFP29279 349 aa21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 CAP2P40123 477 aa21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 FOXP4Q8IVH2 680 aaPredicted RBP21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 SH3RF3Q8TEJ3 882 aaPredicted RBP21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 GCC1Q96CN9 775 aa21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 DBNLQ9UJU6 430 aaKnown RBP21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 AGTPBP1Q9UPW5 1226 aa21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 ZSWIM8A7E2V4 1837 aa21.66■■□□□ 1.06
PTPMT1-201ENST00000326656 TRIM75PA6NK02 468 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 CEP85Q6P2H3 762 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 METTL16Q86W50 562 aaKnown RBP21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 ZNF280CQ8ND82 737 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 RAET1EQ8TD07 263 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 SH3TC2Q8TF17 1288 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 EAF2Q96CJ1 260 aaPredicted RBP21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 GINM1Q9NU53 330 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 AATFQ9NY61 560 aaKnown RBP eCLIP21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 PNMA3Q9UL41 463 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
PTPMT1-201ENST00000326656 MYPNQ86TC9 1320 aa21.64■■□□□ 1.05
PTPMT1-201ENST00000326656 SLURP2P0DP57 97 aa21.64■■□□□ 1.05
PTPMT1-201ENST00000326656 GRK4P32298 578 aa21.64■■□□□ 1.05
PTPMT1-201ENST00000326656 HSP90AB4PQ58FF6 505 aa21.64■■□□□ 1.05
PTPMT1-201ENST00000326656 SMCR8Q8TEV9 937 aaPredicted RBP21.64■■□□□ 1.05
PTPMT1-201ENST00000326656 MGAMO43451 1857 aa21.64■■□□□ 1.05
PTPMT1-201ENST00000326656 USP17L5A8MUK1 530 aa21.63■■□□□ 1.05
PTPMT1-201ENST00000326656 ZAP70P43403 619 aa21.63■■□□□ 1.05
PTPMT1-201ENST00000326656 SPP2Q13103 211 aa21.63■■□□□ 1.05
PTPMT1-201ENST00000326656 PABPC4Q13310 644 aaKnown RBP eCLIP21.63■■□□□ 1.055e-17■■■□□ 18.6
PTPMT1-201ENST00000326656 NKX2-3Q8TAU0 364 aa21.63■■□□□ 1.05
PTPMT1-201ENST00000326656 AS3MTQ9HBK9 375 aa21.63■■□□□ 1.05
PTPMT1-201ENST00000326656 FAM196BA6NMK8 535 aa21.62■■□□□ 1.05
PTPMT1-201ENST00000326656 TGFBRAP1Q8WUH2 860 aa21.62■■□□□ 1.05
PTPMT1-201ENST00000326656 WDR18Q9BV38 432 aa21.62■■□□□ 1.05
PTPMT1-201ENST00000326656 CCDC8Q9H0W5 538 aaPredicted RBP21.62■■□□□ 1.05
PTPMT1-201ENST00000326656 ASNSP08243 561 aa21.61■■□□□ 1.05
PTPMT1-201ENST00000326656 GCLCP48506 637 aaPredicted RBP21.61■■□□□ 1.05
PTPMT1-201ENST00000326656 SH3D19Q5HYK7 790 aa21.61■■□□□ 1.05
PTPMT1-201ENST00000326656 ADGRA1Q86SQ6 560 aa21.61■■□□□ 1.05
PTPMT1-201ENST00000326656 SLAIN1Q8ND83 568 aa21.61■■□□□ 1.05
PTPMT1-201ENST00000326656 PIH1D3Q9NQM4 214 aaKnown RBP21.61■■□□□ 1.05
PTPMT1-201ENST00000326656 FOCADQ5VW36 1801 aa21.61■■□□□ 1.05
PTPMT1-201ENST00000326656 MYO5AQ9Y4I1 1855 aaKnown RBP21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 FLT1P17948 1338 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 ATAD5Q96QE3 1844 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 CAPN2P17655 700 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 UBXN2AP68543 259 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 IRF5Q13568 498 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 RPAP2Q8IXW5 612 aaPredicted RBP21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 PANK1Q8TE04 598 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 PXYLP1Q8TE99 480 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 CHMP4BQ9H444 224 aaKnown RBP21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 MKI67P46013 3256 aaKnown RBP21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 CDK5RAP2Q96SN8 1893 aa21.6■■□□□ 1.05
PTPMT1-201ENST00000326656 CYP7A1P22680 504 aa21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 PRKCZQ05513 592 aa21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 MAP3K12Q12852 859 aa21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 RRP1BQ14684 758 aaKnown RBP21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 FAM110CQ1W6H9 321 aa21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 MAPKAPK5Q8IW41 473 aa21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 TRIM34Q9BYJ4 488 aa21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 TLR7Q9NYK1 1049 aaKnown RBP21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 LOC285556D6RIA3 1793 aa21.59■■□□□ 1.05
PTPMT1-201ENST00000326656 C19orf81C9J6K1 198 aa21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 IDH1O75874 414 aaKnown RBP21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 ECM2O94769 699 aaPredicted RBP21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 HLA-DOAP06340 250 aa21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 GJB1P08034 283 aa21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 TREML2Q5T2D2 321 aa21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 CCDC84Q86UT8 332 aaPredicted RBP21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 CRACR2BQ8N4Y2 399 aaPredicted RBP21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 EXOC6BQ9Y2D4 811 aa21.58■■□□□ 1.05
PTPMT1-201ENST00000326656 BRCA2P51587 3418 aa21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 TNPO2O14787 897 aaKnown RBP21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 MYCP01106 439 aaPredicted RBP21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 HMGCS2P54868 508 aa21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 BACE1P56817 501 aa21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 AACSQ86V21 672 aa21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 COA7Q96BR5 231 aa21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 BIN2Q9UBW5 565 aaPredicted RBP21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 PALD1Q9ULE6 856 aa21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 DDX19BQ9UMR2 479 aa21.57■■□□□ 1.04
PTPMT1-201ENST00000326656 ADCY3O60266 1144 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 HMMRO75330 724 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 GJA8P48165 433 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 FLT3LGP49771 235 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 TTF1Q15361 905 aaPredicted RBP21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 MTFR1Q15390 333 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 ANKRD13CQ8N6S4 541 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 RHPN1Q8TCX5 695 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 GABRQQ9UN88 632 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 SIPA1L1O43166 1804 aa21.56■■□□□ 1.04
PTPMT1-201ENST00000326656 CCL5P13501 91 aa21.55■■□□□ 1.04
PTPMT1-201ENST00000326656 HOXA7P31268 230 aaPredicted RBP21.55■■□□□ 1.04
PTPMT1-201ENST00000326656 CLASRPQ8N2M8 674 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms