RNA–Protein interactions for RNA: ENST00000325752.7

TUBD1-201, Transcript of tubulin delta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TUBD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-201ENST00000325752 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
TUBD1-201ENST00000325752 LONRF3Q496Y0 759 aa13.41□□□□□ -0.26
TUBD1-201ENST00000325752 CRACR2BQ8N4Y2 399 aaPredicted RBP13.41□□□□□ -0.26
TUBD1-201ENST00000325752 OXER1Q8TDS5 423 aa13.41□□□□□ -0.26
TUBD1-201ENST00000325752 RIOK1Q9BRS2 568 aaKnown RBP13.41□□□□□ -0.26
TUBD1-201ENST00000325752 IFNKQ9P0W0 207 aa13.41□□□□□ -0.26
TUBD1-201ENST00000325752 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 NPHP1O15259 732 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 FOXN1O15353 648 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 CDC25BP30305 580 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 NLRP12P59046 1061 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 UBE4AQ14139 1066 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 ESR2Q92731 530 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 NGLY1Q96IV0 654 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 XPO4Q9C0E2 1151 aaKnown RBP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 COL1A1P02452 1464 aaPredicted RBP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 ZNF804BA4D1E1 1349 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 SKILP12757 684 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 TOB1P50616 345 aaPredicted RBP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 SF3B3Q15393 1217 aaKnown RBP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 NBPF11Q86T75 865 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 SLC51AQ86UW1 340 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 NBPF5PQ86XG9 351 aaPredicted RBP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 WASF1Q92558 559 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 ZNF592Q92610 1267 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
TUBD1-201ENST00000325752 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
TUBD1-201ENST00000325752 AHDC1Q5TGY3 1603 aaPredicted RBP13.4□□□□□ -0.27
TUBD1-201ENST00000325752 USP27XA6NNY8 438 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 GNPATO15228 680 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 PTPN21Q16825 1174 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 HSP90AA4PQ58FG1 418 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 CNNM3Q8NE01 707 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 CABP5Q9NP86 173 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 KCNH3Q9ULD8 1083 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 HPSEQ9Y251 543 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 USP17L21D6R901 530 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 DEXIO95424 95 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 ATP1A3P13637 1013 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 TNNT1P13805 278 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 RBM6P78332 1123 aaKnown RBP13.39□□□□□ -0.27
TUBD1-201ENST00000325752 RESP18Q5W5W9 173 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 PDILTQ8N807 584 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 ENAHQ8N8S7 591 aaPredicted RBP13.39□□□□□ -0.27
TUBD1-201ENST00000325752 VPS54Q9P1Q0 977 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 DDX60Q8IY21 1712 aaKnown RBP13.39□□□□□ -0.27
TUBD1-201ENST00000325752 TAF1P21675 1872 aa13.39□□□□□ -0.27
TUBD1-201ENST00000325752 EP400Q96L91 3159 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 STK36Q9NRP7 1315 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 CCDC196A0A1B0GTZ2 297 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 NMT2O60551 498 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 PRDX5P30044 214 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 RPS8P62241 208 aaKnown RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 AKAP17AQ02040 695 aaKnown RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 IFIT1BQ5T764 474 aaKnown RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 FAM205CA6NFA0 338 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 ZPR1O75312 459 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 MECOMQ03112 1051 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 TMC6Q7Z403 805 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 TXNRD3Q86VQ6 643 aa13.38□□□□□ -0.27
TUBD1-201ENST00000325752 METTL16Q86W50 562 aaKnown RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 FOXP4Q8IVH2 680 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 ZSCAN10Q96SZ4 725 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.38□□□□□ -0.27
TUBD1-201ENST00000325752 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-201ENST00000325752 CUTAO60888 179 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 NCAPHQ15003 741 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 SEC23AQ15436 765 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 CTR9Q6PD62 1173 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 PCDHA5Q9Y5H7 936 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 V9GY48 417 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-201ENST00000325752 A0A0U1RQG5 324 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-201ENST00000325752 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
TUBD1-201ENST00000325752 KRBA2Q6ZNG9 492 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 GRAMD1CQ8IYS0 662 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
TUBD1-201ENST00000325752 SHISA4Q96DD7 197 aa13.37□□□□□ -0.27
TUBD1-201ENST00000325752 HIBADHP31937 336 aaKnown RBP13.36□□□□□ -0.27
TUBD1-201ENST00000325752 TPM4P67936 248 aa13.36□□□□□ -0.27
TUBD1-201ENST00000325752 USP49Q70CQ1 688 aa13.36□□□□□ -0.27
TUBD1-201ENST00000325752 IQCA1Q86XH1 822 aa13.36□□□□□ -0.27
TUBD1-201ENST00000325752 TIGD1Q96MW7 591 aa13.36□□□□□ -0.27
TUBD1-201ENST00000325752 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
TUBD1-201ENST00000325752 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
TUBD1-201ENST00000325752 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms