RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 MICU3Q86XE3 530 aa22.88■■□□□ 1.25
SOX2-201ENST00000325404 IFNL3Q8IZI9 196 aa22.88■■□□□ 1.25
SOX2-201ENST00000325404 NKX2-3Q8TAU0 364 aa22.88■■□□□ 1.25
SOX2-201ENST00000325404 HOOK1Q9UJC3 728 aaKnown RBP22.88■■□□□ 1.25
SOX2-201ENST00000325404 SLC12A7Q9Y666 1083 aa22.88■■□□□ 1.25
SOX2-201ENST00000325404 GNAT2P19087 354 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 OLFM4Q6UX06 510 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 KRBA2Q6ZNG9 492 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 PHKBQ93100 1093 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
SOX2-201ENST00000325404 ECM29Q5VYK3 1845 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 DOCK2Q92608 1830 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 FAM182BQ5T319 152 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 KRI1Q8N9T8 703 aaKnown RBP22.87■■□□□ 1.25
SOX2-201ENST00000325404 SPATA5Q8NB90 893 aa22.87■■□□□ 1.25
SOX2-201ENST00000325404 MORC2Q9Y6X9 1032 aaPredicted RBP22.87■■□□□ 1.25
SOX2-201ENST00000325404 SLC5A1P13866 664 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 FCHSD1Q86WN1 690 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 NAPBQ9H115 298 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 TMX1Q9H3N1 280 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 SENP2Q9HC62 589 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 KCNH3Q9ULD8 1083 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 KCNQ4P56696 695 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 AKNAD1Q5T1N1 836 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 NOSTRINQ8IVI9 506 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 NHSQ6T4R5 1651 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 PNPLA7Q6ZV29 1317 aa22.86■■□□□ 1.25
SOX2-201ENST00000325404 LMOD1P29536 600 aaPredicted RBP22.85■■□□□ 1.25
SOX2-201ENST00000325404 TMTC2Q8N394 836 aa22.85■■□□□ 1.25
SOX2-201ENST00000325404 EPB41L4AQ9HCS5 686 aaPredicted RBP22.85■■□□□ 1.25
SOX2-201ENST00000325404 ZSWIM5Q9P217 1185 aa22.85■■□□□ 1.25
SOX2-201ENST00000325404 IFIT3O14879 490 aaKnown RBP22.85■■□□□ 1.25
SOX2-201ENST00000325404 ONECUT3O60422 494 aaPredicted RBP22.85■■□□□ 1.25
SOX2-201ENST00000325404 UBASH3AP57075 661 aa22.85■■□□□ 1.25
SOX2-201ENST00000325404 SAFBQ15424 915 aaKnown RBP eCLIP22.85■■□□□ 1.25
SOX2-201ENST00000325404 CCDC93Q567U6 631 aa22.85■■□□□ 1.25
SOX2-201ENST00000325404 CLEC4GQ6UXB4 293 aa22.85■■□□□ 1.25
SOX2-201ENST00000325404 METTL16Q86W50 562 aaKnown RBP22.85■■□□□ 1.25
SOX2-201ENST00000325404 STAG1Q8WVM7 1258 aa22.85■■□□□ 1.25
SOX2-201ENST00000325404 FOXP1Q9H334 677 aaPredicted RBP22.85■■□□□ 1.25
SOX2-201ENST00000325404 BTAF1O14981 1849 aa22.85■■□□□ 1.25
SOX2-201ENST00000325404 VSTM4Q8IW00 320 aa22.84■■□□□ 1.25
SOX2-201ENST00000325404 ZNF579Q8NAF0 562 aaKnown RBP22.84■■□□□ 1.25
SOX2-201ENST00000325404 MYO5AQ9Y4I1 1855 aaKnown RBP22.84■■□□□ 1.25
SOX2-201ENST00000325404 SPDYE4A6NLX3 237 aa22.84■■□□□ 1.25
SOX2-201ENST00000325404 MMP1P03956 469 aa22.84■■□□□ 1.25
SOX2-201ENST00000325404 MDM2Q00987 491 aaPredicted RBP22.84■■□□□ 1.25
SOX2-201ENST00000325404 NAA30Q147X3 362 aaPredicted RBP22.84■■□□□ 1.25
SOX2-201ENST00000325404 NT5DC1Q5TFE4 455 aa22.84■■□□□ 1.25
SOX2-201ENST00000325404 CNNM3Q8NE01 707 aa22.84■■□□□ 1.25
SOX2-201ENST00000325404 RXRAP19793 462 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 PNOCQ13519 176 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 SART3Q15020 963 aaKnown RBP22.83■■□□□ 1.25
SOX2-201ENST00000325404 RILPL1Q5EBL4 403 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 NACAP1Q9BZK3 213 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 CCDC196A0A1B0GTZ2 297 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 LONRF3Q496Y0 759 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 RC3H1Q5TC82 1133 aaKnown RBP22.83■■□□□ 1.25
SOX2-201ENST00000325404 MFSD6Q6ZSS7 791 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 TRIM22Q8IYM9 498 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 SLC26A6Q9BXS9 759 aa22.83■■□□□ 1.25
SOX2-201ENST00000325404 PHLPP2Q6ZVD8 1323 aa22.83■■□□□ 1.24
SOX2-201ENST00000325404 GSG1L2A8MUP6 293 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 MBD4O95243 580 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 NTSR2O95665 410 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 ATP1A3P13637 1013 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 PTPREP23469 700 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 SEPT12Q8IYM1 358 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 PRDM10Q9NQV6 1147 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 SERPINC1P01008 464 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 CLIC6Q96NY7 704 aa22.82■■□□□ 1.24
SOX2-201ENST00000325404 CCNL1Q9UK58 526 aaPredicted RBP22.82■■□□□ 1.24
SOX2-201ENST00000325404 ETF1P62495 437 aaKnown RBP22.81■■□□□ 1.24
SOX2-201ENST00000325404 PPP2R5BQ15173 497 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 MAGEB6Q8N7X4 407 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 TRIML1Q8N9V2 468 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 FAM53CQ9NYF3 392 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 DACH1Q9UI36 760 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 PCDHA5Q9Y5H7 936 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 BCORQ6W2J9 1755 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 CHD4Q14839 1912 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 GABPB1Q06547 395 aaPredicted RBP22.81■■□□□ 1.24
SOX2-201ENST00000325404 RASGRF1Q13972 1273 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 FOXP4Q8IVH2 680 aaPredicted RBP22.81■■□□□ 1.24
SOX2-201ENST00000325404 STK11IPQ8N1F8 1099 aa22.81■■□□□ 1.24
SOX2-201ENST00000325404 RGL2O15211 777 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 DEXIO95424 95 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 KANK3Q6NY19 840 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 MLKLQ8NB16 471 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 RNF41Q9H4P4 317 aaPredicted RBP22.8■■□□□ 1.24
SOX2-201ENST00000325404 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 RTN1Q16799 776 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 KMT5BQ4FZB7 885 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 CT47A1Q5JQC4 288 aaPredicted RBP22.8■■□□□ 1.24
SOX2-201ENST00000325404 FBXO2Q9UK22 296 aaPredicted RBP22.8■■□□□ 1.24
SOX2-201ENST00000325404 CEP131Q9UPN4 1083 aa22.8■■□□□ 1.24
SOX2-201ENST00000325404 RPS6KA4O75676 772 aa22.79■■□□□ 1.24
SOX2-201ENST00000325404 KIF20AO95235 890 aa22.79■■□□□ 1.24
SOX2-201ENST00000325404 SARSP49591 514 aaKnown RBP22.79■■□□□ 1.24
SOX2-201ENST00000325404 CFAP100Q494V2 611 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms