RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CEP126Q9P2H0 1117 aa20.38■□□□□ 0.85
PRKCB-202ENST00000321728 GPAA1O43292 621 aa20.38■□□□□ 0.85
PRKCB-202ENST00000321728 CERS3Q8IU89 383 aa20.38■□□□□ 0.85
PRKCB-202ENST00000321728 IGSF22Q8N9C0 903 aa20.38■□□□□ 0.85
PRKCB-202ENST00000321728 APPBP2Q92624 585 aa20.38■□□□□ 0.85
PRKCB-202ENST00000321728 ADORA1P30542 326 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 GRIN1Q05586 938 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 MORC3Q14149 939 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 SLC9C2Q5TAH2 1124 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 NFXL1Q6ZNB6 911 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 UBE2Q2LH0YL09 131 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 TATP17735 454 aaPredicted RBP20.37■□□□□ 0.85
PRKCB-202ENST00000321728 APOA5Q6Q788 366 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 CYB5R4Q7L1T6 521 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 MED15Q96RN5 788 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 SENP2Q9HC62 589 aa20.37■□□□□ 0.85
PRKCB-202ENST00000321728 WDR19Q8NEZ3 1342 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 A0A1B0GTH6 734 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 CYP27B1O15528 508 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 VSNL1P62760 191 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 CASP8Q14790 479 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 RGS22Q8NE09 1264 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 MYL10Q9BUA6 226 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 CWC25Q9NXE8 425 aaPredicted RBP20.36■□□□□ 0.85
PRKCB-202ENST00000321728 ZBTB43O43298 467 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 APPP05067 770 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 NOP2P46087 812 aaKnown RBP20.36■□□□□ 0.85
PRKCB-202ENST00000321728 KLHL10Q6JEL2 608 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 NKX2-3Q8TAU0 364 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
PRKCB-202ENST00000321728 NAA15Q9BXJ9 866 aaKnown RBP20.36■□□□□ 0.85
PRKCB-202ENST00000321728 C4AP0C0L4 1744 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 C4BP0C0L5 1744 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 MEGF6O75095 1541 aa20.36■□□□□ 0.85
PRKCB-202ENST00000321728 PLEKHG2Q9H7P9 1386 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 ZAP70P43403 619 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 SCARF1Q14162 830 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 SLC35F6Q8N357 371 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 SLC26A6Q9BXS9 759 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 CTAGE15A4D2H0 777 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 SH2B2O14492 632 aaPredicted RBP20.35■□□□□ 0.85
PRKCB-202ENST00000321728 CTAGE8P0CG41 777 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 PLCD1P51178 756 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 PI16Q6UXB8 463 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 CTAGE6Q86UF2 777 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 NOSTRINQ8IVI9 506 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 CTAGE4Q8IX94 777 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 ELOA2Q8IYF1 753 aaPredicted RBP20.35■□□□□ 0.85
PRKCB-202ENST00000321728 XAGE2Q96GT9 111 aa20.35■□□□□ 0.85
PRKCB-202ENST00000321728 CDC5LQ99459 802 aaKnown RBP20.35■□□□□ 0.85
PRKCB-202ENST00000321728 GOLGA8AA7E2F4 631 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 RANBP6O60518 1105 aaKnown RBP20.34■□□□□ 0.85
PRKCB-202ENST00000321728 SARSP49591 514 aaKnown RBP20.34■□□□□ 0.85
PRKCB-202ENST00000321728 STX17P56962 302 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 NT5DC1Q5TFE4 455 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 TBC1D10CQ8IV04 446 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 GBP3Q9H0R5 595 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 UBN2Q6ZU65 1347 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 BTBD18B2RXH4 712 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 A1BGP04217 495 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 TUBB4BP68371 445 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 TUBB2AQ13885 445 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 TUBB2BQ9BVA1 445 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 NBPF3Q9H094 633 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 AKAP2Q9Y2D5 859 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
PRKCB-202ENST00000321728 B4E1Z4 1266 aa20.33■□□□□ 0.85
PRKCB-202ENST00000321728 ATP2B1P20020 1258 aa20.33■□□□□ 0.85
PRKCB-202ENST00000321728 CABP4P57796 275 aa20.33■□□□□ 0.85
PRKCB-202ENST00000321728 TRIML1Q8N9V2 468 aa20.33■□□□□ 0.85
PRKCB-202ENST00000321728 NBPF26B4DH59 902 aa20.33■□□□□ 0.84
PRKCB-202ENST00000321728 CASP14P31944 242 aa20.33■□□□□ 0.84
PRKCB-202ENST00000321728 SAFBQ15424 915 aaKnown RBP eCLIP20.33■□□□□ 0.843e-6■■■□□ 15
PRKCB-202ENST00000321728 NBPF14Q5TI25 921 aa20.33■□□□□ 0.84
PRKCB-202ENST00000321728 NBPF10Q6P3W6 841 aaKnown RBP20.33■□□□□ 0.84
PRKCB-202ENST00000321728 RASGRP2Q7LDG7 609 aa20.33■□□□□ 0.84
PRKCB-202ENST00000321728 NBPF15Q8N660 670 aa20.33■□□□□ 0.84
PRKCB-202ENST00000321728 FAM71BQ8TC56 605 aa20.33■□□□□ 0.84
PRKCB-202ENST00000321728 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
PRKCB-202ENST00000321728 MSL3Q8N5Y2 521 aaKnown RBP20.32■□□□□ 0.84
PRKCB-202ENST00000321728 ACRBPQ8NEB7 543 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 NAPGQ99747 312 aaPredicted RBP20.32■□□□□ 0.84
PRKCB-202ENST00000321728 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 FBXO2Q9UK22 296 aaPredicted RBP20.32■□□□□ 0.84
PRKCB-202ENST00000321728 SPEF2Q9C093 1822 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 RPS6KA5O75582 802 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 CIAO1O76071 339 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 ERCC5P28715 1186 aaPredicted RBP20.32■□□□□ 0.84
PRKCB-202ENST00000321728 TOB1P50616 345 aaPredicted RBP20.32■□□□□ 0.84
PRKCB-202ENST00000321728 NTRK3Q16288 839 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 CTR9Q6PD62 1173 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 ACBD3Q9H3P7 528 aa20.32■□□□□ 0.84
PRKCB-202ENST00000321728 PHRF1Q9P1Y6 1649 aaKnown RBP20.31■□□□□ 0.84
PRKCB-202ENST00000321728 MFAP3LO75121 409 aa20.31■□□□□ 0.84
PRKCB-202ENST00000321728 PTPREP23469 700 aa20.31■□□□□ 0.84
PRKCB-202ENST00000321728 PIP4K2BP78356 416 aa20.31■□□□□ 0.84
PRKCB-202ENST00000321728 IFNL2Q8IZJ0 200 aa20.31■□□□□ 0.84
PRKCB-202ENST00000321728 FAM204AQ9H8W3 233 aa20.31■□□□□ 0.84
PRKCB-202ENST00000321728 MKRN1Q9UHC7 482 aaKnown RBP20.31■□□□□ 0.84
PRKCB-202ENST00000321728 KCNJ14Q9UNX9 436 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms