RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 WDR66Q8TBY9 1149 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 DNAI1Q9UI46 699 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 RIPOR2Q9Y4F9 1068 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 GNG11P61952 73 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 ZFYVE27Q5T4F4 411 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 ARHGEF1Q92888 912 aaKnown RBP12.53□□□□□ -0.4
TOP3A-201ENST00000321105 MINPP1Q9UNW1 487 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 CARMIL3Q8ND23 1372 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 IBSPP21815 317 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-201ENST00000321105 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
TOP3A-201ENST00000321105 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-201ENST00000321105 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
TOP3A-201ENST00000321105 PARP1P09874 1014 aaKnown RBP12.52□□□□□ -0.4
TOP3A-201ENST00000321105 CALM1P0DP23 149 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 CALM2P0DP24 149 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 CALM3P0DP25 149 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 PRKG1Q13976 671 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 KIF4BQ2VIQ3 1234 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 PNMA1Q8ND90 353 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 UBXN4Q92575 508 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 NEDD4P46934 1319 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 SOS2Q07890 1332 aaPredicted RBP12.52□□□□□ -0.4
TOP3A-201ENST00000321105 USP17L3A6NCW0 530 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 USP17L4A6NCW7 530 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 SP4Q02446 784 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 MECOMQ03112 1051 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 ARID5AQ03989 594 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.4
TOP3A-201ENST00000321105 UBE4AQ14139 1066 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 DTHD1Q6ZMT9 781 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 USP17L1Q7RTZ2 530 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 CALML4Q96GE6 196 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 VPS16Q9H269 839 aa12.52□□□□□ -0.4
TOP3A-201ENST00000321105 ZNF609O15014 1411 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 RTL9Q8NET4 1388 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 BTDP43251 543 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 USH1GQ495M9 461 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 PDCL2Q8N4E4 241 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.41
TOP3A-201ENST00000321105 TDRD12Q587J7 1177 aaKnown RBP12.52□□□□□ -0.41
TOP3A-201ENST00000321105 TTC38Q5R3I4 469 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 EYA3Q99504 573 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.41
TOP3A-201ENST00000321105 FAM196BA6NMK8 535 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 CCNT1O60563 726 aaKnown RBP12.51□□□□□ -0.41
TOP3A-201ENST00000321105 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-201ENST00000321105 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 TMEM132AQ24JP5 1023 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 INF2Q27J81 1249 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-201ENST00000321105 GOLGA6L1Q8N7Z2 621 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 BIN2Q9UBW5 565 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-201ENST00000321105 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 ELP1O95163 1332 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-201ENST00000321105 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-201ENST00000321105 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
TOP3A-201ENST00000321105 KDM6AO15550 1401 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-201ENST00000321105 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
TOP3A-201ENST00000321105 IGSF3O75054 1194 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 CASP1P29466 404 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 CDC27P30260 824 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 GNAQP50148 359 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 PLEKHA8P1O95397 391 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 TRIM21P19474 475 aaKnown RBP12.5□□□□□ -0.41
TOP3A-201ENST00000321105 MYL5Q02045 173 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 PLS1Q14651 629 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 CT47A1Q5JQC4 288 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-201ENST00000321105 DYMQ7RTS9 669 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 XPO4Q9C0E2 1151 aaKnown RBP12.5□□□□□ -0.41
TOP3A-201ENST00000321105 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 ARGLU1Q9NWB6 273 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-201ENST00000321105 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 ZMYM6O95789 1325 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 ZNF75DP51815 510 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 FAM193AP78312 1265 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 RESTQ13127 1097 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 LONRF3Q496Y0 759 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms