RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 IRF6O14896 467 aa17.02■□□□□ 0.31
SCAP-202ENST00000320017 ZNF202O95125 648 aa17.02■□□□□ 0.31
SCAP-202ENST00000320017 FKBP4Q02790 459 aaKnown RBP eCLIP17.02■□□□□ 0.31
SCAP-202ENST00000320017 CCDC148Q8NFR7 591 aa17.02■□□□□ 0.31
SCAP-202ENST00000320017 SCLT1Q96NL6 688 aa17.02■□□□□ 0.31
SCAP-202ENST00000320017 CDC5LQ99459 802 aaKnown RBP17.02■□□□□ 0.31
SCAP-202ENST00000320017 FMN2Q9NZ56 1722 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 ZEB2O60315 1214 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 GPTP24298 496 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 MARCKSP29966 332 aaPredicted RBP17.01■□□□□ 0.31
SCAP-202ENST00000320017 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 TICAM2Q86XR7 235 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 SLC35F6Q8N357 371 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 GGCXP38435 758 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 TRDNQ13061 729 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 E2F5Q15329 346 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 IRAK1P51617 712 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 FKBP15Q5T1M5 1219 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCAP-202ENST00000320017 CAPS2Q9BXY5 557 aa17.01■□□□□ 0.31
SCAP-202ENST00000320017 RPSAP08865 295 aaKnown RBP17■□□□□ 0.31
SCAP-202ENST00000320017 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
SCAP-202ENST00000320017 RAB21Q9UL25 225 aa17■□□□□ 0.31
SCAP-202ENST00000320017 CHUKO15111 745 aa17■□□□□ 0.31
SCAP-202ENST00000320017 TAF5LO75529 589 aa17■□□□□ 0.31
SCAP-202ENST00000320017 CYP21A2P08686 494 aa17■□□□□ 0.31
SCAP-202ENST00000320017 ADD1P35611 737 aaKnown RBP17■□□□□ 0.31
SCAP-202ENST00000320017 CEP85LQ5SZL2 805 aa17■□□□□ 0.31
SCAP-202ENST00000320017 IQCA1Q86XH1 822 aa17■□□□□ 0.31
SCAP-202ENST00000320017 A1BGP04217 495 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 USP5P45974 858 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 MSANTD4Q8NCY6 345 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 CHD2O14647 1828 aaKnown RBP16.99■□□□□ 0.31
SCAP-202ENST00000320017 STX10O60499 249 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 ZKSCAN4Q969J2 545 aaPredicted RBP16.99■□□□□ 0.31
SCAP-202ENST00000320017 CAPZA3Q96KX2 299 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 SYF2O95926 243 aaKnown RBP16.99■□□□□ 0.31
SCAP-202ENST00000320017 GCKP35557 465 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 FMNL3Q8IVF7 1028 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 CLIC4Q9Y696 253 aa16.99■□□□□ 0.31
SCAP-202ENST00000320017 TRMT44Q8IYL2 757 aaKnown RBP16.98■□□□□ 0.31
SCAP-202ENST00000320017 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
SCAP-202ENST00000320017 RXRAP19793 462 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 GBP2P32456 591 aaPredicted RBP16.98■□□□□ 0.31
SCAP-202ENST00000320017 PNOCQ13519 176 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 RBM28Q9NW13 759 aaKnown RBP16.98■□□□□ 0.31
SCAP-202ENST00000320017 CDHR2Q9BYE9 1310 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 ADALQ6DHV7 355 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 CAGE1Q8TC20 777 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
SCAP-202ENST00000320017 SPTLC2O15270 562 aa16.97■□□□□ 0.31
SCAP-202ENST00000320017 PPFIBP1Q86W92 1011 aa16.97■□□□□ 0.31
SCAP-202ENST00000320017 TMEM139Q8IV31 216 aa16.97■□□□□ 0.31
SCAP-202ENST00000320017 RUFY1Q96T51 708 aa16.97■□□□□ 0.31
SCAP-202ENST00000320017 ATP2C2O75185 946 aa16.97■□□□□ 0.31
SCAP-202ENST00000320017 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
SCAP-202ENST00000320017 ATP1A2P50993 1020 aa16.97■□□□□ 0.31
SCAP-202ENST00000320017 MPHOSPH10O00566 681 aaKnown RBP16.96■□□□□ 0.31
SCAP-202ENST00000320017 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 IL2RBP14784 551 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 NAPGQ99747 312 aaPredicted RBP16.96■□□□□ 0.31
SCAP-202ENST00000320017 HOOK1Q9UJC3 728 aaKnown RBP16.96■□□□□ 0.31
SCAP-202ENST00000320017 CEMIPQ8WUJ3 1361 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 A0A1B0GUA9 196 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 GOLGA6BA6NDN3 693 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 NEURL1BA8MQ27 555 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 GCFC2P16383 781 aaKnown RBP16.96■□□□□ 0.31
SCAP-202ENST00000320017 SEMA3FQ13275 785 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 PDCLQ13371 301 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 GCKRQ14397 625 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 STOX1Q6ZVD7 989 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 TC2NQ8N9U0 490 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 PFKFB1P16118 471 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 SYKP43405 635 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.31
SCAP-202ENST00000320017 BPIFA3Q9BQP9 254 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
SCAP-202ENST00000320017 HPCAL4Q9UM19 191 aa16.96■□□□□ 0.31
SCAP-202ENST00000320017 IKBKBO14920 756 aa16.95■□□□□ 0.3
SCAP-202ENST00000320017 TNNI3KQ59H18 835 aa16.95■□□□□ 0.3
SCAP-202ENST00000320017 FPGT-TNNI3KV9GXZ4 949 aa16.95■□□□□ 0.3
SCAP-202ENST00000320017 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
SCAP-202ENST00000320017 ACRBPQ8NEB7 543 aa16.95■□□□□ 0.3
SCAP-202ENST00000320017 HIP1O00291 1037 aa16.95■□□□□ 0.3
SCAP-202ENST00000320017 NAA16Q6N069 864 aaPredicted RBP16.95■□□□□ 0.3
SCAP-202ENST00000320017 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
SCAP-202ENST00000320017 FAXDC2Q96IV6 333 aa16.95■□□□□ 0.3
SCAP-202ENST00000320017 PPP1R12BO60237 982 aaPredicted RBP16.94■□□□□ 0.3
SCAP-202ENST00000320017 ACSBG1Q96GR2 724 aa16.94■□□□□ 0.3
SCAP-202ENST00000320017 ENC1O14682 589 aa16.94■□□□□ 0.3
SCAP-202ENST00000320017 EZRP15311 586 aaKnown RBP16.94■□□□□ 0.3
SCAP-202ENST00000320017 PPFIA1Q13136 1202 aa16.94■□□□□ 0.3
SCAP-202ENST00000320017 AP1ARQ63HQ0 302 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms