RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 COPRSQ9NQ92 184 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 MAN1B1Q9UKM7 699 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 YEATS4O95619 227 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 ZMYM1Q5SVZ6 1142 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 TC2NQ8N9U0 490 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 ZNF274Q96GC6 653 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-201ENST00000318607 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 HSD3B7Q9H2F3 369 aa16.17■□□□□ 0.18
PABPC1-201ENST00000318607 CDC42BPGQ6DT37 1551 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 MACROD2A1Z1Q3 448 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 CTAGE15A4D2H0 777 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 CTAGE9A4FU28 777 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 TPM1P09493 284 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 CTAGE8P0CG41 777 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
PABPC1-201ENST00000318607 ANTXR2P58335 489 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 CTAGE6Q86UF2 777 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 CTAGE4Q8IX94 777 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 EHD4Q9H223 541 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 SEC31BQ9NQW1 1179 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 POLR3EQ9NVU0 708 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 HPS5Q9UPZ3 1129 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 PHLPP2Q6ZVD8 1323 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
PABPC1-201ENST00000318607 TRPM3Q9HCF6 1732 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-201ENST00000318607 ERLIN1O75477 346 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 PTPROQ16827 1216 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 CTNND2Q9UQB3 1225 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 TDO2P48775 406 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 LDHAL6AQ6ZMR3 332 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 KRI1Q8N9T8 703 aaKnown RBP16.15■□□□□ 0.18
PABPC1-201ENST00000318607 JADE2Q9NQC1 790 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 ABCF2Q9UG63 623 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 SAMM50Q9Y512 469 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 GOLGB1Q14789 3259 aaKnown RBP16.15■□□□□ 0.18
PABPC1-201ENST00000318607 ACTN2P35609 894 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
PABPC1-201ENST00000318607 VPS54Q9P1Q0 977 aa16.15■□□□□ 0.18
PABPC1-201ENST00000318607 EIF3JO75822 258 aaKnown RBP16.14■□□□□ 0.17
PABPC1-201ENST00000318607 MAP3K9P80192 1104 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 SSRP1Q08945 709 aaKnown RBP16.14■□□□□ 0.17
PABPC1-201ENST00000318607 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 BRAPQ7Z569 592 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 SNRPA1P09661 255 aaKnown RBP16.14■□□□□ 0.17
PABPC1-201ENST00000318607 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 HDXQ7Z353 690 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 UIMC1Q96RL1 719 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 ANGEL1Q9UNK9 670 aaKnown RBP16.14■□□□□ 0.17
PABPC1-201ENST00000318607 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 PRKAB2O43741 272 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 ATP2C2O75185 946 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 TATP17735 454 aaPredicted RBP16.14■□□□□ 0.17
PABPC1-201ENST00000318607 FILIP1LQ4L180 1135 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
PABPC1-201ENST00000318607 NAPBQ9H115 298 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 HELLSQ9NRZ9 838 aa16.14■□□□□ 0.17
PABPC1-201ENST00000318607 H0YHG0 523 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 ZEB2O60315 1214 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 CASP8Q14790 479 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 TTC31Q49AM3 519 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-201ENST00000318607 DSCC1Q9BVC3 393 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-201ENST00000318607 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 EYA2O00167 538 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
PABPC1-201ENST00000318607 CSRNP2Q9H175 543 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 C19orf44Q9H6X5 657 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 TBX22Q9Y458 520 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 KIF1AQ12756 1690 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 COL22A1Q8NFW1 1626 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-201ENST00000318607 CXCR5P32302 372 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 RFX5P48382 616 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-201ENST00000318607 FXR1P51114 621 aaKnown RBP eCLIP16.13■□□□□ 0.17
PABPC1-201ENST00000318607 KIAA1328Q86T90 577 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 TEX2Q8IWB9 1127 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 ANKRD13CQ8N6S4 541 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 RABGGTAQ92696 567 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 CRACR2AQ9BSW2 395 aa16.13■□□□□ 0.17
PABPC1-201ENST00000318607 CUTAO60888 179 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 KRT9P35527 623 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
PABPC1-201ENST00000318607 KCTD16Q68DU8 428 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.12■□□□□ 0.17
PABPC1-201ENST00000318607 SRGAP1Q7Z6B7 1085 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 CCT5P48643 541 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 APOA5Q6Q788 366 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 ATG9AQ7Z3C6 839 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 SRLQ86TD4 932 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 TRIM22Q8IYM9 498 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms