RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 DYNLL1P63167 89 aaKnown RBP18.41■□□□□ 0.54
USH1C-202ENST00000318024 NSUN4Q96CB9 384 aaKnown RBP18.41■□□□□ 0.54
USH1C-202ENST00000318024 EPB41L4AQ9HCS5 686 aaPredicted RBP18.41■□□□□ 0.54
USH1C-202ENST00000318024 SLC4A4Q9Y6R1 1079 aa18.41■□□□□ 0.54
USH1C-202ENST00000318024 UTRNP46939 3433 aa18.4■□□□□ 0.54
USH1C-202ENST00000318024 PTPN14Q15678 1187 aa18.4■□□□□ 0.54
USH1C-202ENST00000318024 GRIK5Q16478 980 aa18.4■□□□□ 0.54
USH1C-202ENST00000318024 Q6ZUG5 572 aa18.4■□□□□ 0.54
USH1C-202ENST00000318024 IFNL3Q8IZI9 196 aa18.4■□□□□ 0.54
USH1C-202ENST00000318024 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
USH1C-202ENST00000318024 SDR42E1Q8WUS8 393 aa18.4■□□□□ 0.54
USH1C-202ENST00000318024 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
USH1C-202ENST00000318024 CCDC69A6NI79 296 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 GSG1L2A8MUP6 293 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 GOLGA6L19H0YKK7 550 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 SCRN1Q12765 414 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 TERF2Q15554 542 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 STK11IPQ8N1F8 1099 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 ERO1AQ96HE7 468 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 INCENPQ9NQS7 918 aa18.39■□□□□ 0.54
USH1C-202ENST00000318024 MAGEB6P1A0A0J9YX57 407 aa18.39■□□□□ 0.53
USH1C-202ENST00000318024 DPP8Q6V1X1 898 aaPredicted RBP18.39■□□□□ 0.53
USH1C-202ENST00000318024 ILDR1Q86SU0 546 aaPredicted RBP18.39■□□□□ 0.53
USH1C-202ENST00000318024 LLPHQ9BRT6 129 aaKnown RBP18.39■□□□□ 0.53
USH1C-202ENST00000318024 NBPF3Q9H094 633 aa18.39■□□□□ 0.53
USH1C-202ENST00000318024 TAF3Q5VWG9 929 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 FBXO38Q6PIJ6 1188 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 C15orf52Q6ZUT6 534 aaKnown RBP18.38■□□□□ 0.53
USH1C-202ENST00000318024 DHX32Q7L7V1 743 aaKnown RBP18.38■□□□□ 0.53
USH1C-202ENST00000318024 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 NBPF11Q86T75 865 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
USH1C-202ENST00000318024 OSBPL5Q9H0X9 879 aaPredicted RBP18.38■□□□□ 0.53
USH1C-202ENST00000318024 NAPBQ9H115 298 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 PFKFB2O60825 505 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 KRT222Q8N1A0 295 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 NSUN7Q8NE18 718 aaKnown RBP18.38■□□□□ 0.53
USH1C-202ENST00000318024 NKX2-3Q8TAU0 364 aa18.38■□□□□ 0.53
USH1C-202ENST00000318024 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
USH1C-202ENST00000318024 DOCK2Q92608 1830 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 DZIP1Q86YF9 867 aaKnown RBP18.37■□□□□ 0.53
USH1C-202ENST00000318024 TBC1D10CQ8IV04 446 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 ZNF592Q92610 1267 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
USH1C-202ENST00000318024 FTOQ9C0B1 505 aaKnown RBP eCLIP18.37■□□□□ 0.53
USH1C-202ENST00000318024 TMX4Q9H1E5 349 aaPredicted RBP18.37■□□□□ 0.53
USH1C-202ENST00000318024 L2HGDHQ9H9P8 463 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 TDO2P48775 406 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 CTDSPL2Q05D32 466 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 DOK7Q18PE1 504 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 ZNF771Q7L3S4 317 aaPredicted RBP18.37■□□□□ 0.53
USH1C-202ENST00000318024 WDR66Q8TBY9 1149 aa18.37■□□□□ 0.53
USH1C-202ENST00000318024 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
USH1C-202ENST00000318024 SALL1Q9NSC2 1324 aa18.36■□□□□ 0.53
USH1C-202ENST00000318024 A0A0U1RQG5 324 aaPredicted RBP18.36■□□□□ 0.53
USH1C-202ENST00000318024 LDHBP07195 334 aaKnown RBP18.36■□□□□ 0.53
USH1C-202ENST00000318024 HMGB1P09429 215 aaKnown RBP18.36■□□□□ 0.53
USH1C-202ENST00000318024 DIXDC1Q155Q3 683 aa18.36■□□□□ 0.53
USH1C-202ENST00000318024 USP28Q96RU2 1077 aa18.36■□□□□ 0.53
USH1C-202ENST00000318024 AGXT2Q9BYV1 514 aa18.36■□□□□ 0.53
USH1C-202ENST00000318024 ZC3H12CQ9C0D7 883 aaKnown RBP18.36■□□□□ 0.53
USH1C-202ENST00000318024 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
USH1C-202ENST00000318024 A0A087WWV3 80 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 H3BQV1 296 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 IL1R1P14778 569 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 EXOSC10Q01780 885 aaKnown RBP18.35■□□□□ 0.53
USH1C-202ENST00000318024 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 ATL3Q6DD88 541 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 FBXW7Q969H0 707 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 ANO10Q9NW15 660 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 ZNF446Q9NWS9 450 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 SMIM22K7EJ46 135 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 GNAT2P19087 354 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 FAM160A1Q05DH4 1040 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 ELF2Q15723 593 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 CCDC93Q567U6 631 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 COL11A2P13942 1736 aaPredicted RBP18.35■□□□□ 0.53
USH1C-202ENST00000318024 NEDD4P46934 1319 aa18.35■□□□□ 0.53
USH1C-202ENST00000318024 SLU7O95391 586 aaKnown RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 GTF2IP78347 998 aa18.34■□□□□ 0.53
USH1C-202ENST00000318024 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 STYK1Q6J9G0 422 aa18.34■□□□□ 0.53
USH1C-202ENST00000318024 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
USH1C-202ENST00000318024 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 KIF2AO00139 706 aaPredicted RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 APOBRQ0VD83 1088 aa18.34■□□□□ 0.53
USH1C-202ENST00000318024 ALX1Q15699 326 aa18.34■□□□□ 0.53
USH1C-202ENST00000318024 SPTY2D1Q68D10 685 aaPredicted RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 FILIP1Q7Z7B0 1213 aa18.34■□□□□ 0.53
USH1C-202ENST00000318024 RALYLQ86SE5 291 aaKnown RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
USH1C-202ENST00000318024 TRMT1Q9NXH9 659 aaKnown RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.34■□□□□ 0.53
USH1C-202ENST00000318024 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 V9GYY5 206 aaPredicted RBP18.34■□□□□ 0.53
USH1C-202ENST00000318024 CACNA1SQ13698 1873 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms