RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 CTR9Q6PD62 1173 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
MSRA-201ENST00000317173 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 TTC14Q96N46 770 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 TBC1D2Q9BYX2 928 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 USP40Q9NVE5 1235 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
MSRA-201ENST00000317173 TLL2Q9Y6L7 1015 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 FLT1P17948 1338 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
MSRA-201ENST00000317173 USP17L12C9JPN9 530 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 USP17L21D6R901 530 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 ANKRD1Q15327 319 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
MSRA-201ENST00000317173 NBPF3Q9H094 633 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 MCM9Q9NXL9 1143 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 ROBO3Q96MS0 1386 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
MSRA-201ENST00000317173 WDHD1O75717 1129 aaPredicted RBP16.65■□□□□ 0.26
MSRA-201ENST00000317173 DLGAP5Q15398 846 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 TBC1D10CQ8IV04 446 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 HHIPL1Q96JK4 782 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 IDI2Q9BXS1 227 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 KRT23Q9C075 422 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 ZNF408Q9H9D4 720 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
MSRA-201ENST00000317173 ASTN2O75129 1339 aaPredicted RBP16.65■□□□□ 0.26
MSRA-201ENST00000317173 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 ADM5C9JUS6 153 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 WNT10BO00744 389 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 FGRP09769 529 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 ECE1P42892 770 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 VEGFBP49765 207 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 C12orf60Q5U649 245 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 FBXL16Q8N461 479 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
MSRA-201ENST00000317173 COL2A1P02458 1487 aaPredicted RBP16.64■□□□□ 0.25
MSRA-201ENST00000317173 MCM5P33992 734 aa16.63■□□□□ 0.25
MSRA-201ENST00000317173 NBPF9Q3BBW0 867 aa16.63■□□□□ 0.25
MSRA-201ENST00000317173 SAPCD2Q86UD0 394 aa16.63■□□□□ 0.25
MSRA-201ENST00000317173 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
MSRA-201ENST00000317173 MTA3Q9BTC8 594 aa16.63■□□□□ 0.25
MSRA-201ENST00000317173 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
MSRA-201ENST00000317173 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
MSRA-201ENST00000317173 POLR3DP05423 398 aaPredicted RBP16.62■□□□□ 0.25
MSRA-201ENST00000317173 EXOSC10Q01780 885 aaKnown RBP16.62■□□□□ 0.25
MSRA-201ENST00000317173 CTDSPL2Q05D32 466 aa16.62■□□□□ 0.25
MSRA-201ENST00000317173 PDE4BQ07343 736 aa16.62■□□□□ 0.25
MSRA-201ENST00000317173 TTC6Q86TZ1 520 aa16.62■□□□□ 0.25
MSRA-201ENST00000317173 ZBED3Q96IU2 234 aaPredicted RBP16.62■□□□□ 0.25
MSRA-201ENST00000317173 PRMT6Q96LA8 375 aaPredicted RBP16.62■□□□□ 0.25
MSRA-201ENST00000317173 OSBPL5Q9H0X9 879 aaPredicted RBP16.62■□□□□ 0.25
MSRA-201ENST00000317173 ZNF287Q9HBT7 754 aa16.62■□□□□ 0.25
MSRA-201ENST00000317173 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
MSRA-201ENST00000317173 MYH8P13535 1937 aa16.62■□□□□ 0.25
MSRA-201ENST00000317173 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
MSRA-201ENST00000317173 MYO1BO43795 1136 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 ORC4O43929 436 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 ENTPD3O75355 529 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 AK2P54819 239 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 PAXIP1Q6ZW49 1069 aaPredicted RBP16.61■□□□□ 0.25
MSRA-201ENST00000317173 APOBEC3FQ8IUX4 373 aaKnown RBP16.61■□□□□ 0.25
MSRA-201ENST00000317173 C2orf69Q8N8R5 385 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 CDCA5Q96FF9 252 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 DHX36Q9H2U1 1008 aaKnown RBP16.61■□□□□ 0.25
MSRA-201ENST00000317173 GBA2Q9HCG7 927 aaPredicted RBP16.61■□□□□ 0.25
MSRA-201ENST00000317173 NEDD4P46934 1319 aa16.61■□□□□ 0.25
MSRA-201ENST00000317173 CPA1P15085 419 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 ESR2Q92731 530 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 CAPNS2Q96L46 248 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 LIMCH1Q9UPQ0 1083 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.6■□□□□ 0.25
MSRA-201ENST00000317173 PICALMQ13492 652 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 TMEM87BQ96K49 555 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
MSRA-201ENST00000317173 TDRD3Q9H7E2 651 aaKnown RBP16.6■□□□□ 0.25
MSRA-201ENST00000317173 DDX4Q9NQI0 724 aaKnown RBP16.6■□□□□ 0.25
MSRA-201ENST00000317173 PCDHAC2Q9Y5I4 1007 aa16.6■□□□□ 0.25
MSRA-201ENST00000317173 CYP2D7A0A087X1C5 515 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 B4E1Z4 1266 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 PRC1O43663 620 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
MSRA-201ENST00000317173 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
MSRA-201ENST00000317173 FKBP1BP68106 108 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 FGD1P98174 961 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 DLK2Q6UY11 383 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 EHD4Q9H223 541 aa16.59■□□□□ 0.25
MSRA-201ENST00000317173 SH2B1Q9NRF2 756 aaPredicted RBP16.59■□□□□ 0.25
MSRA-201ENST00000317173 SAP30BPQ9UHR5 308 aaKnown RBP16.59■□□□□ 0.25
MSRA-201ENST00000317173 ATRNL1Q5VV63 1379 aa16.58■□□□□ 0.25
MSRA-201ENST00000317173 CYP2D6P10635 497 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms