RNA–Protein interactions for RNA: ENST00000316436.3

LSMEM2-201, Transcript of leucine rich single-pass membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM2, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2-201ENST00000316436 DNAJC18Q9H819 358 aa18.84■□□□□ 0.61
LSMEM2-201ENST00000316436 SSC5DA1L4H1 1573 aa18.83■□□□□ 0.61
LSMEM2-201ENST00000316436 CASTP20810 708 aaKnown RBP18.83■□□□□ 0.6
LSMEM2-201ENST00000316436 TEPSINQ96N21 525 aa18.83■□□□□ 0.6
LSMEM2-201ENST00000316436 TM6SF1Q9BZW5 370 aa18.83■□□□□ 0.6
LSMEM2-201ENST00000316436 PAPPA2Q9BXP8 1791 aa18.82■□□□□ 0.6
LSMEM2-201ENST00000316436 PRDM1O75626 825 aa18.82■□□□□ 0.6
LSMEM2-201ENST00000316436 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
LSMEM2-201ENST00000316436 ANTXR2P58335 489 aa18.82■□□□□ 0.6
LSMEM2-201ENST00000316436 KRT32Q14532 448 aa18.82■□□□□ 0.6
LSMEM2-201ENST00000316436 C16orf86Q6ZW13 317 aa18.82■□□□□ 0.6
LSMEM2-201ENST00000316436 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
LSMEM2-201ENST00000316436 FAM196BA6NMK8 535 aa18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 RASA3Q14644 834 aa18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 RABEP1Q15276 862 aa18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 USP50Q70EL3 339 aaPredicted RBP18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 TCEANC2Q96MN5 208 aa18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 NEK1Q96PY6 1258 aa18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 EHD4Q9H223 541 aa18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 PITPNM2Q9BZ72 1349 aa18.81■□□□□ 0.6
LSMEM2-201ENST00000316436 IQCA1LA6NCM1 817 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 B4E1Z4 1266 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 ORC4O43929 436 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 POTEIP0CG38 1075 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 POTEJP0CG39 1038 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 CYB5R4Q7L1T6 521 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 APOBEC3FQ8IUX4 373 aaKnown RBP18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 AMOTL1Q8IY63 956 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 ZNF784Q8NCA9 323 aaPredicted RBP18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 TTC14Q96N46 770 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 CSRNP1Q96S65 589 aa18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 DHX36Q9H2U1 1008 aaKnown RBP18.8■□□□□ 0.6
LSMEM2-201ENST00000316436 RPS6KB1P23443 525 aa18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 SHMT1P34896 483 aa18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 TNFAIP1Q13829 316 aa18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 MFSD6Q6ZSS7 791 aa18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 TTC6Q86TZ1 520 aa18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 METTL16Q86W50 562 aaKnown RBP18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 SERPINB13Q9UIV8 391 aa18.79■□□□□ 0.6
LSMEM2-201ENST00000316436 HLA-DOAP06340 250 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 RASA1P20936 1047 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 CDK8P49336 464 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 EXOSC10Q01780 885 aaKnown RBP18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 BLOC1S2Q6QNY1 142 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 DLK2Q6UY11 383 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 RUFY3Q7L099 469 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 ZSCAN29Q8IWY8 852 aaPredicted RBP18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 NCOA7Q8NI08 942 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 DEFB129Q9H1M3 183 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 RNF41Q9H4P4 317 aaPredicted RBP18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 ATAD5Q96QE3 1844 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 OTOFQ9HC10 1997 aa18.78■□□□□ 0.6
LSMEM2-201ENST00000316436 ADM5C9JUS6 153 aa18.77■□□□□ 0.6
LSMEM2-201ENST00000316436 KDM4AO75164 1064 aa18.77■□□□□ 0.6
LSMEM2-201ENST00000316436 TNNI2P48788 182 aa18.77■□□□□ 0.6
LSMEM2-201ENST00000316436 RRP12Q5JTH9 1297 aaKnown RBP18.77■□□□□ 0.6
LSMEM2-201ENST00000316436 CHST3Q7LGC8 479 aa18.77■□□□□ 0.6
LSMEM2-201ENST00000316436 PI4KBQ9UBF8 816 aa18.77■□□□□ 0.6
LSMEM2-201ENST00000316436 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.6
LSMEM2-201ENST00000316436 SLC3A2P08195 630 aaKnown RBP18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 PCP11498 1178 aaKnown RBP18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 PSMA5P28066 241 aa18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 NEK4P51957 841 aa18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 PDE4BQ07343 736 aa18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 SHROOM1Q2M3G4 852 aaPredicted RBP18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 EAPPQ56P03 285 aaPredicted RBP18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 RALYLQ86SE5 291 aaKnown RBP18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 ZNF526Q8TF50 670 aaPredicted RBP18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 CNNM2Q9H8M5 875 aa18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 RRAGCQ9HB90 399 aa18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 GPHNQ9NQX3 736 aaPredicted RBP18.77■□□□□ 0.59
LSMEM2-201ENST00000316436 PRC1O43663 620 aa18.76■□□□□ 0.59
LSMEM2-201ENST00000316436 RRP1BQ14684 758 aaKnown RBP18.76■□□□□ 0.59
LSMEM2-201ENST00000316436 PRAMEF18Q5VWM3 479 aa18.76■□□□□ 0.59
LSMEM2-201ENST00000316436 DHX32Q7L7V1 743 aaKnown RBP18.76■□□□□ 0.59
LSMEM2-201ENST00000316436 KRT23Q9C075 422 aa18.76■□□□□ 0.59
LSMEM2-201ENST00000316436 TOMM22Q9NS69 142 aa18.76■□□□□ 0.59
LSMEM2-201ENST00000316436 PLIN4Q96Q06 1357 aa18.76■□□□□ 0.59
LSMEM2-201ENST00000316436 TOB2Q14106 344 aaPredicted RBP18.75■□□□□ 0.59
LSMEM2-201ENST00000316436 FAM47AQ5JRC9 791 aa18.75■□□□□ 0.59
LSMEM2-201ENST00000316436 NBPF12Q5TAG4 269 aaPredicted RBP18.75■□□□□ 0.59
LSMEM2-201ENST00000316436 ZC3H15Q8WU90 426 aaKnown RBP18.75■□□□□ 0.59
LSMEM2-201ENST00000316436 ZSWIM5Q9P217 1185 aa18.75■□□□□ 0.59
LSMEM2-201ENST00000316436 SWAP70Q9UH65 585 aa18.75■□□□□ 0.59
LSMEM2-201ENST00000316436 WDR19Q8NEZ3 1342 aa18.75■□□□□ 0.59
LSMEM2-201ENST00000316436 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 VEGFAP15692 232 aaPredicted RBP18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 AK2P54819 239 aa18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 MAP3K10Q02779 954 aa18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 TRDNQ13061 729 aa18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 TATDN1Q6P1N9 297 aa18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 PNMA8AQ86V59 439 aaPredicted RBP18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 CRACR2BQ8N4Y2 399 aaPredicted RBP18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 ESR2Q92731 530 aa18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 SENP2Q9HC62 589 aa18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
LSMEM2-201ENST00000316436 PPP2R3BQ9Y5P8 575 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms