RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 GNL2Q13823 731 aaKnown RBP8.83□□□□□ -1
TRIM55-202ENST00000315962 WTAPQ15007 396 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 SLC27A3Q5K4L6 730 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 KIAA1524Q8TCG1 905 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 ALG1Q9BT22 464 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 FUCA2Q9BTY2 467 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 TRIM5Q9C035 493 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 DNAJC25Q9H1X3 360 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 CD209Q9NNX6 404 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
TRIM55-202ENST00000315962 RGS17Q9UGC6 210 aaPredicted RBP8.83□□□□□ -1
TRIM55-202ENST00000315962 GGA1Q9UJY5 639 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 CLIC4Q9Y696 253 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 TNKSO95271 1327 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 PLCD1P51178 756 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 DBNDD1Q9H9R9 158 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 XDHP47989 1333 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 ERICH2A1L162 156 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 TYRO3Q06418 890 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 SPECC1Q5M775 1068 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 TBC1D16Q8TBP0 767 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 ZBTB9Q96C00 473 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 RBM17Q96I25 401 aaKnown RBP8.82□□□□□ -1
TRIM55-202ENST00000315962 NUP62CLQ9H1M0 184 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 PCDHAC2Q9Y5I4 1007 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 MRVI1Q9Y6F6 885 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 G3V3G9 751 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 VEGFAP15692 232 aaPredicted RBP8.82□□□□□ -1
TRIM55-202ENST00000315962 IARSP41252 1262 aaKnown RBP8.82□□□□□ -1
TRIM55-202ENST00000315962 CACNB3P54284 484 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 DCAF8Q5TAQ9 597 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 ZNF772Q68DY9 489 aaPredicted RBP8.82□□□□□ -1
TRIM55-202ENST00000315962 ENAHQ8N8S7 591 aaPredicted RBP8.82□□□□□ -1
TRIM55-202ENST00000315962 TNMDQ9H2S6 317 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 CPVLQ9H3G5 476 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 CBX8Q9HC52 389 aa8.82□□□□□ -1
TRIM55-202ENST00000315962 A0A1B0GVL5 298 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 USP17L3A6NCW0 530 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 USP17L4A6NCW7 530 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 DHX16O60231 1041 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 CCDC192P0DO97 292 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 HMGN5P82970 282 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 SYNE3Q6ZMZ3 975 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 USP17L1Q7RTZ2 530 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 FBXO18Q8NFZ0 1043 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 TRMT1Q9NXH9 659 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 PPP1R1BQ9UD71 204 aaPredicted RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 SALL1Q9NSC2 1324 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 C4BP0C0L5 1744 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 COL5A3P25940 1745 aaPredicted RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 BAZ2BQ9UIF8 2168 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 TSPY2A6NKD2 308 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 USP27XA6NNY8 438 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 PPEF1O14829 653 aaPredicted RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 GNAT2P19087 354 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 CRY2Q49AN0 593 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 ISM2Q6H9L7 571 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 ZNF804AQ7Z570 1209 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 SMAP1Q8IYB5 467 aaPredicted RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 LLPHQ9BRT6 129 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 KRT23Q9C075 422 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 THSD7AQ9UPZ6 1657 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 PNPLA7Q6ZV29 1317 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 BTBD18B2RXH4 712 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 PLEKHA8P1O95397 391 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 EIF6P56537 245 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 NR5A1Q13285 461 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 SART3Q15020 963 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 MAP3K11Q16584 847 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 KRT40Q6A162 431 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 TMEM87AQ8NBN3 555 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 TDRD7Q8NHU6 1098 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 STAG1Q8WVM7 1258 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 ESR2Q92731 530 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 PRIMPOLQ96LW4 560 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 CRNKL1Q9BZJ0 848 aaKnown RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 SCAND2PQ9GZW5 306 aaPredicted RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 STX8Q9UNK0 236 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 PARP3Q9Y6F1 533 aa8.81□□□□□ -1
TRIM55-202ENST00000315962 V9GY48 417 aaPredicted RBP8.81□□□□□ -1
TRIM55-202ENST00000315962 SRGNP10124 158 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 BTDP43251 543 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 NTRK3Q16288 839 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 UVSSAQ2YD98 709 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 IFIT1BQ5T764 474 aaKnown RBP8.8□□□□□ -1
TRIM55-202ENST00000315962 FILIP1Q7Z7B0 1213 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 CLEC10AQ8IUN9 316 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 ZNF654Q8IZM8 581 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 FANCBQ8NB91 859 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
TRIM55-202ENST00000315962 ZC3H12CQ9C0D7 883 aaKnown RBP8.8□□□□□ -1
TRIM55-202ENST00000315962 GOLPH3LQ9H4A5 285 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 RAD21O60216 631 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 GOLGA8HP0CJ92 632 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 EVCP57679 992 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 TFAP4Q01664 338 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 ALX1Q15699 326 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 RTN1Q16799 776 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms