RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 SEC23AQ15436 765 aa17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 MRPS27Q92552 414 aaKnown RBP17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 PRIMPOLQ96LW4 560 aa17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 ZNF830Q96NB3 372 aaPredicted RBP17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 MTA3Q9BTC8 594 aa17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 PDS5AQ29RF7 1337 aaKnown RBP17.12■□□□□ 0.33
RPUSD2-201ENST00000315616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 NPHP1O15259 732 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 CHAF1AQ13111 956 aaPredicted RBP17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 CTR9Q6PD62 1173 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 STK36Q9NRP7 1315 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 ERICH2A1L162 156 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 CTAGE5O15320 804 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 KINO60870 393 aaKnown RBP17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 U2AF2P26368 475 aaKnown RBP eCLIP17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 ZNF165P49910 485 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 RTN1Q16799 776 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 AXDND1Q5T1B0 1012 aaPredicted RBP17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 TMTC2Q8N394 836 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 CCDC82Q8N4S0 544 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 ESR2Q92731 530 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
RPUSD2-201ENST00000315616 A0A087WWV3 80 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 ZNF654Q8IZM8 581 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 ERCC4Q92889 916 aaPredicted RBP17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 UBAC1Q9BSL1 405 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 TNKSO95271 1327 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 USP17L12C9JPN9 530 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 USP17L21D6R901 530 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 PRDM1O75626 825 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 FGRP09769 529 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 RXRBP28702 533 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 CRACR2BQ8N4Y2 399 aaPredicted RBP17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
RPUSD2-201ENST00000315616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 MAP3K14Q99558 947 aa17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 GRAPQ13588 217 aa17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 C11orf57Q6ZUT1 292 aaPredicted RBP17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 GRAPLQ8TC17 118 aaPredicted RBP17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
RPUSD2-201ENST00000315616 TRIM29Q14134 588 aa17.08■□□□□ 0.33
RPUSD2-201ENST00000315616 PTPAQ15257 358 aa17.08■□□□□ 0.33
RPUSD2-201ENST00000315616 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.33
RPUSD2-201ENST00000315616 ZSCAN10Q96SZ4 725 aaPredicted RBP17.08■□□□□ 0.33
RPUSD2-201ENST00000315616 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.33
RPUSD2-201ENST00000315616 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.33
RPUSD2-201ENST00000315616 ANKIB1Q9P2G1 1089 aa17.08■□□□□ 0.33
RPUSD2-201ENST00000315616 IQCB1Q15051 598 aa17.08■□□□□ 0.32
RPUSD2-201ENST00000315616 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
RPUSD2-201ENST00000315616 ARID3AQ99856 593 aa17.08■□□□□ 0.32
RPUSD2-201ENST00000315616 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.32
RPUSD2-201ENST00000315616 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 BTBD18B2RXH4 712 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 RCAN1P53805 252 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 GNL2Q13823 731 aaKnown RBP17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 PRDM10Q9NQV6 1147 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 CMA1P23946 247 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 GTF2F1P35269 517 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 DNTTIP2Q5QJE6 756 aaKnown RBP17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 POTEAQ6S8J7 498 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
RPUSD2-201ENST00000315616 MROH7-TTC4A0A0A0MT08 1334 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 CCDC196A0A1B0GTZ2 297 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 MMP1P03956 469 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 GYS1P13807 737 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 STX1AQ16623 288 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 TRIM22Q8IYM9 498 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 SPC24Q8NBT2 197 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 WASF1Q92558 559 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 ZNF202O95125 648 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 CAVIN2O95810 425 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 CYP2D6P10635 497 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 ADRA2BP18089 450 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 KRT27Q7Z3Y8 459 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
RPUSD2-201ENST00000315616 ZBTB22O15209 634 aa17.05■□□□□ 0.32
RPUSD2-201ENST00000315616 DEXIO95424 95 aa17.05■□□□□ 0.32
RPUSD2-201ENST00000315616 PFKFB1P16118 471 aa17.05■□□□□ 0.32
RPUSD2-201ENST00000315616 TOB1P50616 345 aaPredicted RBP17.05■□□□□ 0.32
RPUSD2-201ENST00000315616 GRIK5Q16478 980 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms