RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
CHFR-202ENST00000315585 MBD4O95243 580 aa17.22■□□□□ 0.35
CHFR-202ENST00000315585 SERPINB2P05120 415 aa17.22■□□□□ 0.35
CHFR-202ENST00000315585 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■■■■ 27.8
CHFR-202ENST00000315585 PRR5LQ6MZQ0 368 aa17.22■□□□□ 0.35
CHFR-202ENST00000315585 MICU3Q86XE3 530 aa17.22■□□□□ 0.35
CHFR-202ENST00000315585 STAG1Q8WVM7 1258 aa17.22■□□□□ 0.35
CHFR-202ENST00000315585 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
CHFR-202ENST00000315585 COL4A1P02462 1669 aa17.22■□□□□ 0.35
CHFR-202ENST00000315585 NID2Q14112 1375 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 TDO2P48775 406 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 NLRP12P59046 1061 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 LRRC8AQ8IWT6 810 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 FLAD1Q8NFF5 587 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 MYO1BO43795 1136 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 IFNAR1P17181 557 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 RXRBP28702 533 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
CHFR-202ENST00000315585 SYKP43405 635 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 C17orf53Q8N3J3 647 aaPredicted RBP17.21■□□□□ 0.35
CHFR-202ENST00000315585 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 ZSWIM5Q9P217 1185 aa17.21■□□□□ 0.35
CHFR-202ENST00000315585 TAF1P21675 1872 aa17.2■□□□□ 0.34
CHFR-202ENST00000315585 AXDND1Q5T1B0 1012 aaPredicted RBP17.2■□□□□ 0.34
CHFR-202ENST00000315585 ELOA2Q8IYF1 753 aaPredicted RBP17.2■□□□□ 0.34
CHFR-202ENST00000315585 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
CHFR-202ENST00000315585 MYO5AQ9Y4I1 1855 aaKnown RBP17.2■□□□□ 0.34
CHFR-202ENST00000315585 CUTAO60888 179 aa17.2■□□□□ 0.34
CHFR-202ENST00000315585 FMNL1O95466 1100 aaPredicted RBP17.2■□□□□ 0.34
CHFR-202ENST00000315585 RBM10P98175 930 aaKnown RBP17.2■□□□□ 0.34
CHFR-202ENST00000315585 AOPEPQ8N6M6 819 aa17.2■□□□□ 0.34
CHFR-202ENST00000315585 RAI14Q9P0K7 980 aa17.2■□□□□ 0.34
CHFR-202ENST00000315585 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
CHFR-202ENST00000315585 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 PFKFB1P16118 471 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 WTAPQ15007 396 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 NTRK3Q16288 839 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 UBE2Q2Q8WVN8 375 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 ABCF2Q9UG63 623 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 SLC4A4Q9Y6R1 1079 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 NEDD4P46934 1319 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 GSG1L2A8MUP6 293 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 KIF28PB7ZC32 967 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 IKBKBO14920 756 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 PCP11498 1178 aaKnown RBP17.19■□□□□ 0.34
CHFR-202ENST00000315585 TFCP2L1Q9NZI6 479 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 NRBP1Q9UHY1 535 aa17.19■□□□□ 0.34
CHFR-202ENST00000315585 KIF2AO00139 706 aaPredicted RBP17.18■□□□□ 0.34
CHFR-202ENST00000315585 APBA3O96018 575 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 XBP1P17861 261 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 CYP7A1P22680 504 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 CDC27P30260 824 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 CRY2Q49AN0 593 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 CACTINQ8WUQ7 758 aaKnown RBP17.18■□□□□ 0.34
CHFR-202ENST00000315585 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 ANKIB1Q9P2G1 1089 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 CEP131Q9UPN4 1083 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 XDHP47989 1333 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 RTN1Q16799 776 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
CHFR-202ENST00000315585 RILPL1Q5EBL4 403 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 PROM2Q8N271 834 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHFR-202ENST00000315585 FOXP1Q9H334 677 aaPredicted RBP17.18■□□□□ 0.34
CHFR-202ENST00000315585 ARMT1Q9H993 441 aa17.18■□□□□ 0.34
CHFR-202ENST00000315585 IQSEC3Q9UPP2 1182 aaPredicted RBP17.18■□□□□ 0.34
CHFR-202ENST00000315585 DEXIO95424 95 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 CCDC150Q8NCX0 1101 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 UBAC1Q9BSL1 405 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 EPB41L4AQ9HCS5 686 aaPredicted RBP17.17■□□□□ 0.34
CHFR-202ENST00000315585 HPSEQ9Y251 543 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 BBOX1O75936 387 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 TUBB4AP04350 444 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 LRMPQ12912 555 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
CHFR-202ENST00000315585 TMC4Q7Z404 712 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 ESR2Q92731 530 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 PHKBQ93100 1093 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 OSBPL5Q9H0X9 879 aaPredicted RBP17.17■□□□□ 0.34
CHFR-202ENST00000315585 TOMM22Q9NS69 142 aa17.17■□□□□ 0.34
CHFR-202ENST00000315585 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 CBFA2T2O43439 604 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 SKILP12757 684 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 TNNT1P13805 278 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 OLFM4Q6UX06 510 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 NOSTRINQ8IVI9 506 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 KCND1Q9NSA2 647 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 TIAM2Q8IVF5 1701 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 CTDSPL2Q05D32 466 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 PTPAQ15257 358 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 SYCP1Q15431 976 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 RESP18Q5W5W9 173 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
CHFR-202ENST00000315585 TUBE1Q9UJT0 475 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 ANAPC4Q9UJX5 808 aa17.16■□□□□ 0.34
CHFR-202ENST00000315585 POLRMTO00411 1230 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms