RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 NR1I3Q14994 352 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 UBE3BQ7Z3V4 1068 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 XAGE2Q96GT9 111 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-201ENST00000315544 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.94
CNOT4-201ENST00000315544 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 PHF20Q9BVI0 1012 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 NCOA5Q9HCD5 579 aaKnown RBP9.2□□□□□ -0.94
CNOT4-201ENST00000315544 SASH3O75995 380 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 HMGB1P09429 215 aaKnown RBP9.19□□□□□ -0.94
CNOT4-201ENST00000315544 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
CNOT4-201ENST00000315544 TBC1D9BQ66K14 1250 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 PDXDC2PQ6P474 469 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 CHMP4AQ9BY43 222 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 IMPACTQ9P2X3 320 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 REXO2Q9Y3B8 237 aaKnown RBP9.19□□□□□ -0.94
CNOT4-201ENST00000315544 A0A0U1RQJ8 604 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
CNOT4-201ENST00000315544 APBB1O00213 710 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 PRR5LQ6MZQ0 368 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 ZC3H3Q8IXZ2 948 aaKnown RBP9.19□□□□□ -0.94
CNOT4-201ENST00000315544 ATRIPQ8WXE1 791 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 POTECB2RU33 542 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 SRGNP10124 158 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 EIF2S2P20042 333 aaKnown RBP9.19□□□□□ -0.94
CNOT4-201ENST00000315544 CNNM4Q6P4Q7 775 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 APOA5Q6Q788 366 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 AIFM3Q96NN9 605 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 ARXQ96QS3 562 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 PSMD1Q99460 953 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 BRIP1Q9BX63 1249 aa9.19□□□□□ -0.94
CNOT4-201ENST00000315544 COL11A1P12107 1806 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-201ENST00000315544 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 NAALADL2Q58DX5 795 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 NLGN2Q8NFZ4 835 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
CNOT4-201ENST00000315544 APPBP2Q92624 585 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 NAP1L5Q96NT1 182 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-201ENST00000315544 ZMYND15Q9H091 742 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 GREM2Q9H772 168 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 ARHGAP25P42331 645 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 USP5P45974 858 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 KIAA2012Q0VF49 1180 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 CRAMP1Q96RY5 1269 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 A0A1B0GTH6 734 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
CNOT4-201ENST00000315544 ZAP70P43403 619 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 TROAPQ12815 778 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 BLOC1S2Q6QNY1 142 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 DDX46Q7L014 1031 aaKnown RBP9.18□□□□□ -0.94
CNOT4-201ENST00000315544 ZNF507Q8TCN5 953 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 RUFY2Q8WXA3 655 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 CRYGNQ8WXF5 182 aa9.18□□□□□ -0.94
CNOT4-201ENST00000315544 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.18□□□□□ -0.94
CNOT4-201ENST00000315544 PPP1R3GB7ZBB8 358 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 KLRC4O43908 158 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 PSMA5P28066 241 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 CTSWP56202 376 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 PPP1R13BQ96KQ4 1090 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 SMTNL1A8MU46 457 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 TRIM6-TRIM34B2RNG4 842 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 PDE8BO95263 885 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 ABL1P00519 1130 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 VEGFAP15692 232 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-201ENST00000315544 MAP3K9P80192 1104 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 MAP3K11Q16584 847 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 ZBED3Q96IU2 234 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-201ENST00000315544 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-201ENST00000315544 INCENPQ9NQS7 918 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 WWC3Q9ULE0 1092 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 FOXN1O15353 648 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 PTPREP23469 700 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 LTV1Q96GA3 475 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-201ENST00000315544 DNAJC25Q9H1X3 360 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 CWC25Q9NXE8 425 aaPredicted RBP9.17□□□□□ -0.94
CNOT4-201ENST00000315544 RAB21Q9UL25 225 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 ZNF536O15090 1300 aa9.17□□□□□ -0.94
CNOT4-201ENST00000315544 SF3B2Q13435 895 aaKnown RBP9.16□□□□□ -0.94
CNOT4-201ENST00000315544 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
CNOT4-201ENST00000315544 LARP1BQ659C4 914 aaKnown RBP9.16□□□□□ -0.94
CNOT4-201ENST00000315544 VSTM4Q8IW00 320 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 RNF214Q8ND24 703 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 PHLPP2Q6ZVD8 1323 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 MCCP23508 829 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 KRT85P78386 507 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 TADA3O75528 432 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 IFNAR1P17181 557 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 RASGRF1Q13972 1273 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 XDHP47989 1333 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 CNTNAP5Q8WYK1 1306 aa9.16□□□□□ -0.94
CNOT4-201ENST00000315544 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
CNOT4-201ENST00000315544 PTCD1O75127 700 aaKnown RBP9.15□□□□□ -0.94
CNOT4-201ENST00000315544 LCA5LO95447 670 aa9.15□□□□□ -0.94
CNOT4-201ENST00000315544 PFKFB1P16118 471 aa9.15□□□□□ -0.94
CNOT4-201ENST00000315544 NLRP12P59046 1061 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms